RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GIMAP5Q96F15 307 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 TIMD4Q96H15 378 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 DPCDQ9BVM2 203 aaPredicted RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 NUBP2Q9Y5Y2 271 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 STMND1H3BQB6 276 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 DOK2O60496 412 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 LIPCP11150 499 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 SARAFQ96BY9 339 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 TMEM246Q9BRR3 403 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 KIAA1551Q9HCM1 1747 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 CADP27708 2225 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 MARF1Q9Y4F3 1742 aaKnown RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 COL6A6A6NMZ7 2263 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 A0A1W2PR48 441 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF732B4DXR9 585 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 FZD7O75084 574 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 ALPLP05186 524 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 ZDHHC11BP0C7U3 371 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 TEAD1P28347 426 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 BLVRBP30043 206 aaPredicted RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 CPEB2Q7Z5Q1 589 aaKnown RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 PDZD9Q8IXQ8 264 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 SLC35A4Q96G79 324 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 CCDC74BQ96LY2 380 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 MUTYHQ9UIF7 546 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 EMX1Q04741 257 aaPredicted RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 FAM71E1Q6IPT2 247 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 BOD1Q96IK1 185 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 OR2B2Q9GZK3 357 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 MYO16Q9Y6X6 1858 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 TUSC2O75896 110 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 RAD52P43351 418 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 GRB2P62993 217 aaKnown RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 HES1Q14469 280 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 AADACL3Q5VUY0 350 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 OR52W1Q6IF63 320 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 FAM198BQ6UWH4 519 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 PM20D2Q8IYS1 436 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF583Q96ND8 569 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 NKX3-1Q99801 234 aaPredicted RBP12.39□□□□□ -0.43
TRAF3-208ENST00000560371 EMC6Q9BV81 110 aa12.39□□□□□ -0.43
TRAF3-208ENST00000560371 RREB1Q92766 1687 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 TSPAN15O95858 294 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 ZGLP1P0C6A0 271 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 ELAVL4P26378 380 aaKnown RBP12.38□□□□□ -0.43
TRAF3-208ENST00000560371 EVI2BP34910 448 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 CLDN6P56747 220 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 FAM53BQ14153 422 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 HLA-BQ31612 363 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 GPR155Q7Z3F1 870 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 TMEM30AQ9NV96 361 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 PAQR5Q9NXK6 330 aaPredicted RBP12.38□□□□□ -0.43
TRAF3-208ENST00000560371 RPH3ALQ9UNE2 315 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 IGLV3-25P01717 112 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 HOXB5P09067 269 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 CD79BP40259 229 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 CLN3Q13286 438 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 GDPD3Q7L5L3 318 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 HRASLS5Q96KN8 279 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 UBL7Q96S82 380 aaPredicted RBP12.38□□□□□ -0.43
TRAF3-208ENST00000560371 BARHL1Q9BZE3 327 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 CACNA1BQ00975 2339 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 PMS2P1A4D2B8 440 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 OPRL1P41146 370 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 NR4A2P43354 598 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 MEP1BQ16820 701 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 NXNL2Q5VZ03 156 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 B3GNT8Q7Z7M8 397 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 KMT5CQ86Y97 462 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 STK35Q8TDR2 534 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 SECTM1Q8WVN6 248 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 FRZBQ92765 325 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 GHSRQ92847 366 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 INTS12Q96CB8 462 aaKnown RBP12.38□□□□□ -0.43
TRAF3-208ENST00000560371 WNK2Q9Y3S1 2297 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 HLA-AP01891 365 aaKnown RBP12.38□□□□□ -0.43
TRAF3-208ENST00000560371 FOXK2Q01167 660 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 MYBPHQ13203 477 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 SDF2Q99470 211 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 LAMB2P55268 1798 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 TSPAN11A1L157 253 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 METTL12A8MUP2 240 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 VAMP5O95183 116 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 CLEC3BP05452 202 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 EIF4EP06730 217 aaKnown RBP12.38□□□□□ -0.43
TRAF3-208ENST00000560371 IL3RAP26951 378 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF93P35789 620 aaPredicted RBP12.38□□□□□ -0.43
TRAF3-208ENST00000560371 SLC22A25Q6T423 547 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 BPIFB2Q8N4F0 458 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 COQ10AQ96MF6 247 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 SLC23A2Q9UGH3 650 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 BTBD17A6NE02 478 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 PRAF2O60831 178 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 KITLGP21583 273 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 TBCEQ15813 527 aaPredicted RBP12.38□□□□□ -0.43
TRAF3-208ENST00000560371 PRTGQ2VWP7 1150 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 ZNF836Q6ZNA1 936 aa12.38□□□□□ -0.43
TRAF3-208ENST00000560371 KCNG3Q8TAE7 436 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms