RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SLC17A5Q9NRA2 495 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC22A11Q9NSA0 550 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 COMMD9Q9P000 198 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 CDC42EP3Q9UKI2 254 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 WASF3Q9UPY6 502 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC35A3Q9Y2D2 325 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 YBX2Q9Y2T7 364 aaKnown RBP5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 IRAK3Q9Y616 596 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 V9GY05 133 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 SCN10AQ9Y5Y9 1956 aa5.43□□□□□ -1.54
SNRPA1-209ENST00000560307 A0A1B0GVC2 190 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 GXYLT2A0PJZ3 443 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 MEX3AA1L020 520 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF503-AS2A6NEH8 195 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 GGT3PA6NGU5 568 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 A6NIN4 97 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 RIIAD1A6NNX1 92 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 J3QLW9 94 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 GPR31O00270 319 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 RFXAPO00287 272 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 PLPP1O14494 284 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 XRCC3O43542 346 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 FRS3O43559 492 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 FMO6PO60774 539 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TBL1XO60907 577 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 B4GALT2O60909 372 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SH3BGRLO75368 114 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF432O94892 652 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 C1orf105O95561 183 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC16A8O95907 504 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 IL18BPO95998 194 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 IFNGP01579 166 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 GLAP06280 429 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 CHRM4P08173 479 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 CLTBP09497 229 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC2A1P11166 492 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TPT1P13693 172 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 NPPBP16860 134 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF19P17023 458 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF3P17036 446 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 BMP7P18075 431 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ADCYAP1P18509 176 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 AGAP20933 346 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TBXA2RP21731 343 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 MPZP25189 248 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 NDUFS1P28331 727 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 BSGP35613 385 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 EIF2S3P41091 472 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 KCNJ3P48549 501 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 PGDP52209 483 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ACTBP60709 375 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 RAB4BP61018 213 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 EIF5AP63241 154 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ACTG1P63261 375 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SORDQ00796 357 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 PJVKQ0ZLH3 352 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 FUT5Q11128 374 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ELAVL2Q12926 359 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 HABP2Q14520 560 aaPredicted RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ALG11Q2TAA5 492 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 LBHQ53QV2 105 aaPredicted RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC35D3Q5M8T2 416 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 CLEC12AQ5QGZ9 265 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 KHDRBS2Q5VWX1 349 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 AWAT2Q6E213 333 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 PLBD1Q6P4A8 553 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ARHGAP11AQ6P4F7 1023 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 C11orf88Q6PI97 169 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 PRSS55Q6UWB4 352 aaPredicted RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 GLB1LQ6UWU2 654 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TMPRSS11FQ6ZWK6 438 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TAS1R1Q7RTX1 841 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SERINC5Q86VE9 423 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 COMTD1Q86VU5 262 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM173Q86WV6 379 aaPredicted RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 BEST3Q8N1M1 668 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM229BQ8NBD8 167 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 RELL2Q8NC24 303 aaPredicted RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 C17orf47Q8NEP4 570 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC30A7Q8NEW0 376 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 OR10H4Q8NGA5 316 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 OR4D9Q8NGE8 314 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 OR1S2Q8NGQ3 325 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 OR9A1PQ8NGU1 263 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SYNPRQ8TBG9 265 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF480Q8WV37 535 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 XAGE5Q8WWM1 108 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SMPDL3BQ92485 455 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 RAB8BQ92930 207 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 LIN37Q96GY3 246 aaPredicted RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SAMD8Q96LT4 415 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 WDR92Q96MX6 357 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 CD180Q99467 661 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 PARK7Q99497 189 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 TEAD3Q99594 435 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 GAL3ST1Q99999 423 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 WFDC6Q9BQY6 131 aa5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 PAPOLGQ9BWT3 736 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 SORBS1Q9BX66 1292 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-209ENST00000560307 POTEKPQ9BYX7 375 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms