RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 CENPKQ9BS16 269 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 MTG1Q9BT17 334 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 ROGDIQ9GZN7 287 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 DEFB127Q9H1M4 99 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 NEUROG2Q9H2A3 272 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 RBKSQ9H477 322 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 INPP5EQ9NRR6 644 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 THUMPD1Q9NXG2 353 aaKnown RBP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 PSMC3IPQ9P2W1 217 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-221ENST00000556534 PSME2Q9UL46 239 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 VANGL2Q9ULK5 521 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 TRAF3IP3Q9Y228 551 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 TRAPPC4Q9Y296 219 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 KCNIP3Q9Y2W7 256 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 MAP3K15Q6ZN16 1313 aa2.68□□□□□ -1.98
SCFD1-221ENST00000556534 INSRP06213 1382 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 NINLQ9Y2I6 1382 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 A0A0G2JN53 185 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 WRBO00258 174 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 HIP1O00291 1037 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 OR7A10O76100 309 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 SLC25A27O95847 323 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 OR8G3PP0DMU2 310 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 SSR1P43307 286 aaKnown RBP2.67□□□□□ -1.98
SCFD1-221ENST00000556534 PKNOX1P55347 436 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 RPS15P62841 145 aaKnown RBP2.67□□□□□ -1.98
SCFD1-221ENST00000556534 PPP1R7Q15435 360 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 ATP6AP1Q15904 470 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 MRPL23Q16540 153 aaKnown RBP2.67□□□□□ -1.98
SCFD1-221ENST00000556534 DGUOKQ16854 277 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 SPANXN2Q5MJ10 180 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 OR52E8Q6IFG1 317 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 SASS6Q6UVJ0 657 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 Q6ZSR3 168 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 ZNF621Q6ZSS3 439 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 SLC25A48Q6ZT89 311 aaKnown RBP2.67□□□□□ -1.98
SCFD1-221ENST00000556534 NIPA1Q7RTP0 329 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 ASCL5Q7RTU5 278 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 SLC26A11Q86WA9 606 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 OR7G2Q8NG99 324 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 ACER1Q8TDN7 264 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 ACMSDQ8TDX5 336 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 C11orf70Q9BRQ4 267 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 FAIM2Q9BWQ8 316 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 GEMIN7Q9H840 131 aaKnown RBP2.67□□□□□ -1.98
SCFD1-221ENST00000556534 ZNF160Q9HCG1 818 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 DMAP1Q9NPF5 467 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-221ENST00000556534 CYTL1Q9NRR1 136 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 QPCTLQ9NXS2 382 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 CLCF1Q9UBD9 225 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 COPS3Q9UNS2 423 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 STARD10Q9Y365 291 aa2.67□□□□□ -1.98
SCFD1-221ENST00000556534 RPL36Q9Y3U8 105 aaKnown RBP2.67□□□□□ -1.98
SCFD1-221ENST00000556534 OR5B21A6NL26 309 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 C9JVG2 144 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 BOLA2-SMG1P6H3BVE0 249 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 CASC3O15234 703 aaKnown RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 UGT1A9O60656 530 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 FTH1P02794 183 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 SERPIND1P05546 499 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 UBTFL1P0CB47 393 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 TDGF1P13385 188 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 TNNI1P19237 187 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 FMO3P31513 532 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 VHLP40337 213 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 PEX19P40855 299 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 GLP1RP43220 463 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 OR1G1P47890 313 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 GSSP48637 474 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 TDGF1P3P51864 188 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 KCNJ2P63252 427 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 SCRN3Q0VDG4 424 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 ASPHQ12797 758 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 EIF4EBP1Q13541 118 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 OR5I1Q13606 314 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 GGTLC2Q14390 218 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 KIAA0087Q14695 138 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 C16orf72Q14CZ0 275 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 PIGGQ5H8A4 983 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 SAMD4BQ5PRF9 694 aaKnown RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 SLC8B1Q6J4K2 584 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 ZNF620Q6ZNG0 422 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 UTS2BQ765I0 119 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 NUDCD3Q8IVD9 361 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 PIANPQ8IYJ0 282 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 H1FOOQ8IZA3 346 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 BBOF1Q8ND07 529 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 OR4C5Q8NGB2 326 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 FAM81AQ8TBF8 368 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 PLPPR1Q8TBJ4 325 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 MCUR1Q96AQ8 359 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 CMTM7Q96FZ5 175 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 ITCHQ96J02 903 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 TGS1Q96RS0 853 aaKnown RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 MRPL45Q9BRJ2 306 aaKnown RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 TMEM246Q9BRR3 403 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 PELOQ9BRX2 385 aaKnown RBP2.66□□□□□ -1.98
SCFD1-221ENST00000556534 PLA2G2FQ9BZM2 168 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 SRMSQ9H3Y6 488 aa2.66□□□□□ -1.98
SCFD1-221ENST00000556534 RNF167Q9H6Y7 350 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms