RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLC7A7Q9UM01 511 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 STAB1Q9NY15 2570 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 CUBNO60494 3623 aa19.5■□□□□ 0.71
ACTN1-220ENST00000556433 LRP5LA4QPB2 252 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 TRAPPC13A5PLN9 417 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 RAB36O95755 333 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 IGFBP1P08833 259 aaPredicted RBP19.49■□□□□ 0.71
ACTN1-220ENST00000556433 ZNF35P13682 527 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 SRD5A1P18405 259 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 CD247P20963 164 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 ZP4Q12836 540 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 FAM120AOSQ5T036 256 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 IL17RELQ6ZVW7 336 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 HDXQ7Z353 690 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 ZNF786Q8N393 782 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 LRRC17Q8N6Y2 441 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 OR6X1Q8NH79 312 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 TMEM54Q969K7 222 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 MRPL24Q96A35 216 aaKnown RBP19.49■□□□□ 0.71
ACTN1-220ENST00000556433 TAMM41Q96BW9 452 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 MRPL37Q9BZE1 423 aaKnown RBP19.49■□□□□ 0.71
ACTN1-220ENST00000556433 NANSQ9NR45 359 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 GLTPQ9NZD2 209 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 ZNF224Q9NZL3 707 aa19.49■□□□□ 0.71
ACTN1-220ENST00000556433 A0A0G2JND7 137 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 KPNA4O00629 521 aaPredicted RBP19.48■□□□□ 0.71
ACTN1-220ENST00000556433 RNF13O43567 381 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 UBL3O95164 117 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 HIST1H2ABP04908 130 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 PATE4P0C8F1 98 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 PCGF2P35227 344 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 GLRXP35754 106 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 EVX1P49640 407 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 MSMPQ1L6U9 139 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 INTS11Q5TA45 600 aaKnown RBP19.48■□□□□ 0.71
ACTN1-220ENST00000556433 GKAP1Q5VSY0 366 aaPredicted RBP19.48■□□□□ 0.71
ACTN1-220ENST00000556433 HIST3H2AQ7L7L0 130 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 PIWIL3Q7Z3Z3 882 aaKnown RBP19.48■□□□□ 0.71
ACTN1-220ENST00000556433 TSPYL5Q86VY4 417 aaPredicted RBP19.48■□□□□ 0.71
ACTN1-220ENST00000556433 HIST1H2ACQ93077 130 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 MPP4Q96JB8 637 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 TPK1Q9H3S4 243 aa19.48■□□□□ 0.71
ACTN1-220ENST00000556433 EDF1O60869 148 aaKnown RBP19.47■□□□□ 0.71
ACTN1-220ENST00000556433 GALK2Q01415 458 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 RAB39AQ14964 217 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 METTL21CQ5VZV1 264 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 SKA3Q8IX90 412 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 ZNF566Q969W8 418 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 SOX7Q9BT81 388 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 REV1Q9UBZ9 1251 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 ZNF229Q9UJW7 825 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 FBXL3Q9UKT7 428 aa19.47■□□□□ 0.71
ACTN1-220ENST00000556433 LYNX1G3V0Z9 82 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 SYNGR3O43761 229 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 LILRA1O75019 489 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 TACSTD2P09758 323 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 LYNX1P0DP58 116 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 UMPSP11172 480 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 HNF1AP20823 631 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 THBS2P35442 1172 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 GZMMP51124 257 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 CHN2P52757 468 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 CYLC2Q14093 348 aaPredicted RBP19.46■□□□□ 0.71
ACTN1-220ENST00000556433 MELKQ14680 651 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 VMACQ2NL98 169 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 LRFN4Q6PJG9 635 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 FGFBP3Q8TAT2 258 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 RASSF5Q8WWW0 418 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 SLC25A44Q96H78 314 aaPredicted RBP19.46■□□□□ 0.71
ACTN1-220ENST00000556433 SYT3Q9BQG1 590 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 SIKE1Q9BRV8 207 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 SLC19A3Q9BZV2 496 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 PCDHAC1Q9H158 963 aa19.46■□□□□ 0.71
ACTN1-220ENST00000556433 M0R233 179 aa19.45■□□□□ 0.7
ACTN1-220ENST00000556433 LSP1P33241 339 aa19.45■□□□□ 0.7
ACTN1-220ENST00000556433 NANOGP8Q6NSW7 305 aa19.45■□□□□ 0.7
ACTN1-220ENST00000556433 CCDC80Q76M96 950 aa19.45■□□□□ 0.7
ACTN1-220ENST00000556433 SLC22A24Q8N4F4 322 aa19.45■□□□□ 0.7
ACTN1-220ENST00000556433 ZNF426Q9BUY5 554 aa19.45■□□□□ 0.7
ACTN1-220ENST00000556433 MS4A5Q9H3V2 200 aa19.45■□□□□ 0.7
ACTN1-220ENST00000556433 NANOGQ9H9S0 305 aa19.45■□□□□ 0.7
ACTN1-220ENST00000556433 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.44■□□□□ 0.79e-7■■■□□ 15.1
ACTN1-220ENST00000556433 BLOC1S5-TXNDC5H3BN57 136 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 FBP2O00757 339 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 DHHO43323 396 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 ENTPD5O75356 428 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 BCL10O95999 233 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 SERPINA5P05154 406 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 VIMP08670 466 aaKnown RBP19.44■□□□□ 0.7
ACTN1-220ENST00000556433 ASAH2BP0C7U1 165 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 OR8G3PP0DMU2 310 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 TCN1P20061 433 aaPredicted RBP19.44■□□□□ 0.7
ACTN1-220ENST00000556433 APEX1P27695 318 aaKnown RBP19.44■□□□□ 0.7
ACTN1-220ENST00000556433 IL2RGP31785 369 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 CRYBA2P53672 197 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 RPS23P62266 143 aaKnown RBP19.44■□□□□ 0.7
ACTN1-220ENST00000556433 RIN1Q13671 783 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 FXNQ16595 210 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 CR1LQ2VPA4 569 aa19.44■□□□□ 0.7
ACTN1-220ENST00000556433 NANOGNBQ7Z5D8 188 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms