RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 PIWIL3Q7Z3Z3 882 aaKnown RBP18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 PHC2Q8IXK0 858 aa18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 CDK20Q8IZL9 346 aa18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 ZNF786Q8N393 782 aa18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 VANGL1Q8TAA9 524 aaPredicted RBP18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 MRPL24Q96A35 216 aaKnown RBP18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 THOC1Q96FV9 657 aaKnown RBP18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 NPHS2Q9NP85 383 aa18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 ZNF229Q9UJW7 825 aa18.64■□□□□ 0.57
SDR39U1-216ENST00000556175 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.64■□□□□ 0.573e-22■□□□□ 9.6
SDR39U1-216ENST00000556175 TMEM129A0AVI4 362 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 SH3PXD2BA1X283 911 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 CH25HO95992 272 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 HIST1H2ABP04908 130 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 ZNF35P13682 527 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 CD247P20963 164 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 GLRXP35754 106 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 GIPRP48546 466 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 RAB1AP62820 205 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 FAM120AOSQ5T036 256 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 GKAP1Q5VSY0 366 aaPredicted RBP18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 METTL21CQ5VZV1 264 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 HIST3H2AQ7L7L0 130 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 UBASH3BQ8TF42 649 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 HPS1Q92902 700 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 HIST1H2ACQ93077 130 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 TMEM54Q969K7 222 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 ZNF566Q969W8 418 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 MS4A3Q96HJ5 214 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 PCDHAC1Q9H158 963 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 VIPAS39Q9H9C1 493 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 MRGBPQ9NV56 204 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 GLTPQ9NZD2 209 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 SLC7A7Q9UM01 511 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 MALRD1Q5VYJ5 2156 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 SVEP1Q4LDE5 3571 aa18.63■□□□□ 0.57
SDR39U1-216ENST00000556175 M0R233 179 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 RNF13O43567 381 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 SYNGR3O43761 229 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 EDF1O60869 148 aaKnown RBP18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 TGFAP01135 160 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 ADRA2AP08913 450 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 TACSTD2P09758 323 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 UGT2A3Q6UWM9 527 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 WDR88Q6ZMY6 472 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 ARIH2OSQ8N7S6 290 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 OR10A6Q8NH74 314 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 TAMM41Q96BW9 452 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 SLC25A44Q96H78 314 aaPredicted RBP18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 ZNF75AQ96N20 296 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 SH3GL1Q99961 368 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 MS4A5Q9H3V2 200 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 ARGLU1Q9NWB6 273 aaPredicted RBP18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 ZNF224Q9NZL3 707 aa18.62■□□□□ 0.57
SDR39U1-216ENST00000556175 A0A0G2JND7 137 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 KPNA4O00629 521 aaPredicted RBP18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 FARS2O95363 451 aaKnown RBP18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 UMPSP11172 480 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 CYLC2Q14093 348 aaPredicted RBP18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 VMACQ2NL98 169 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 REP15Q6BDI9 236 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 NANOGNBQ7Z5D8 188 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 DPPA2Q7Z7J5 298 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 RBM45Q8IUH3 476 aaKnown RBP18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 WDFY1Q8IWB7 410 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 ZCCHC24Q8N2G6 241 aaKnown RBP18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 ZNF426Q9BUY5 554 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 MRPL37Q9BZE1 423 aaKnown RBP18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 TAS2R5Q9NYW4 299 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 SLC7A8Q9UHI5 535 aa18.61■□□□□ 0.57
SDR39U1-216ENST00000556175 LYPD3O95274 346 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 THY1P04216 161 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 OR8G3PP0DMU2 310 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 CCDC80Q76M96 950 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 HDDC2Q7Z4H3 204 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 SLC22A24Q8N4F4 322 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 OR4D11Q8NGI4 311 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 POLR2J2Q9GZM3 115 aaKnown RBP18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 POLR2J3Q9H1A7 115 aaKnown RBP18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 REV1Q9UBZ9 1251 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 BAG5Q9UL15 447 aa18.6■□□□□ 0.57
SDR39U1-216ENST00000556175 SLC22A23A1A5C7 686 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 BCL10O95999 233 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 IGHG1P01857 330 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 SERPINA5P05154 406 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 ASAH2BP0C7U1 165 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 APEX1P27695 318 aaKnown RBP18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 RIN1Q13671 783 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 RAB39AQ14964 217 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 FXNQ16595 210 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 SKA3Q8IX90 412 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 TPK1Q9H3S4 243 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 C1orf198Q9H425 327 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 TMEM38BQ9NVV0 291 aa18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 ZNF346Q9UL40 294 aaKnown RBP18.59■□□□□ 0.57
SDR39U1-216ENST00000556175 LRP5LA4QPB2 252 aa18.58■□□□□ 0.56
SDR39U1-216ENST00000556175 DHHO43323 396 aa18.58■□□□□ 0.56
SDR39U1-216ENST00000556175 IGFBP1P08833 259 aaPredicted RBP18.58■□□□□ 0.56
SDR39U1-216ENST00000556175 PGA4P0DJD7 388 aa18.58■□□□□ 0.56
SDR39U1-216ENST00000556175 PGA3P0DJD8 388 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms