RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PP632Q6XCG6 107 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 STAC2Q6ZMT1 411 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 Q6ZVH6 145 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 COPS6Q7L5N1 327 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 PLA2G4DQ86XP0 818 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 APOBEC3FQ8IUX4 373 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 MREGQ8N565 214 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ZNF491Q8N8L2 437 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 C8orf31Q8N9H6 132 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 CATSPER1Q8NEC5 780 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 OR10G7Q8NGN6 311 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 OR1S2Q8NGQ3 325 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 OR9A4Q8NGU2 314 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 CXorf40AQ8TE69 158 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 PYROXD1Q8WU10 500 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 C17orf50Q8WW18 174 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 CRYGNQ8WXF5 182 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 MYDGFQ969H8 173 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 PSMG2Q969U7 264 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 CMTM7Q96FZ5 175 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SEC22AQ96IW7 307 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 C9orf72Q96LT7 481 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 FAM210AQ96ND0 272 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 MS4A4EQ96PG1 132 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 TSSK3Q96PN8 268 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 TBX15Q96SF7 602 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 HSD17B14Q9BPX1 270 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 MRPL45Q9BRJ2 306 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 UTP23Q9BRU9 249 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 NAT9Q9BTE0 207 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 MED10Q9BTT4 135 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 CHID1Q9BWS9 393 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 NMUR2Q9GZQ4 415 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 DRC3Q9H069 523 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 OPN3Q9H1Y3 402 aaPredicted RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 PPDPFQ9H3Y8 114 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ZNF385DQ9H6B1 395 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 RNF167Q9H6Y7 350 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 NIPAL2Q9H841 368 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 LY9Q9HBG7 655 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 TIGARQ9NQ88 270 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 HRASLS2Q9NWW9 162 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 MS4A12Q9NXJ0 267 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 THYN1Q9P016 225 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 ADAM22Q9P0K1 906 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 STOX2Q9P2F5 926 aaPredicted RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 B4GALT7Q9UBV7 327 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 DUX4Q9UBX2 424 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 MTRF1LQ9UGC7 380 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 CIDEBQ9UHD4 219 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 MMP17Q9ULZ9 603 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SLC22A14Q9Y267 594 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 YARS2Q9Y2Z4 477 aaKnown RBP1.8□□□□□ -2.12
SRP54-204ENST00000553923 PLLPQ9Y342 182 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 CBY1Q9Y3M2 126 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 SAR1BQ9Y6B6 198 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 CNTNAP1P78357 1384 aa1.8□□□□□ -2.12
SRP54-204ENST00000553923 TRBV9A0A0B4J1U6 114 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 SMIM28A0A1B0GU29 152 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 GSTTP1A0A1W2PQM5 241 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 MGAT4DA6NG13 374 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 EFCAB7A8K855 629 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 PP2D1A8MPX8 630 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 RSPH10B2B2RC85 870 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 G3V2L1 256 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 SMLR1H3BR10 107 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 GFYI3L273 518 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CDC7O00311 574 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CCL21O00585 134 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NDUFAB1O14561 156 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ZBTB5O15062 677 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 XRCC2O43543 280 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CHST1O43916 411 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 RAMP1O60894 148 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 MPDU1O75352 247 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CRTAPO75718 401 aaPredicted RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 CEACAM4O75871 244 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NOL4O94818 638 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NXPH4O95158 308 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 IGHV3-13P01766 116 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 RPN2P04844 631 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 GLAP06280 429 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 KLK3P07288 261 aaPredicted RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 CD55P08174 381 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 RSPH10BP0C881 870 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 RD3LP0DJH9 198 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 MYOGP15173 224 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NPR2P20594 1047 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 HTR2CP28335 458 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 CALCRP30988 508 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 SHMT2P34897 504 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 RBM34P42696 430 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 RANBP1P43487 201 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 RGRP47804 291 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 ARHGDIBP52566 201 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 RIDAP52758 137 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 BIDP55957 195 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 NDUFV3P56181 108 aaKnown RBP1.79□□□□□ -2.12
SRP54-204ENST00000553923 SRPXP78539 464 aa1.79□□□□□ -2.12
SRP54-204ENST00000553923 MRPS11P82912 194 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms