RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SLC38A1	Q9H2H9	487 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZCCHC4	Q9H5U6	513 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	COPZ2	Q9P299	210 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NOTCH4	Q99466	2003 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACOD1	A6NK06	481 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IDS	B3KWA1	339 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AK1	P00568	194 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RLN1	P04808	185 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RAB40AL	P0C0E4	278 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CD46	P15529	392 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FPR3	P25089	353 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FXYD6P3	P58550	94 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PITPNA	Q00169	270 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF85	Q03923	595 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DECR1	Q16698	335 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC22A10	Q63ZE4	541 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ELP2	Q6IA86	826 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMUB2	Q71RG4	321 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LRRC25	Q8N386	305 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TEX19	Q8NA77	164 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BVES	Q8NE79	360 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR13C2	Q8NGS9	318 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR9A2	Q8NGT5	310 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SMPDL3B	Q92485	455 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	WNT2B	Q93097	391 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZMYND19	Q96E35	227 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CNRIP1	Q96F85	164 aa	Predicted RBP	5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PGLYRP3	Q96LB9	341 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF559	Q9BR84	538 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SCNM1	Q9BWG6	230 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PINK1	Q9BXM7	581 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR8D2	Q9GZM6	311 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ATG4B	Q9Y4P1	393 aa		5.17	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MEIS3P1	A6NDR6	274 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KRBOX1	C9JBD0	128 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		J3QRE1	110 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HMGN1	P05114	100 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF35	P13682	527 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AKR1C2	P52895	323 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ERVK-25	P63136	954 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AKR1C1	Q04828	323 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BAMBI	Q13145	260 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CRMP1	Q14194	572 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SSPN	Q14714	243 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HSD17B12	Q53GQ0	312 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	JMJD6	Q6NYC1	403 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMEM88	Q6PEY1	159 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	WDR88	Q6ZMY6	472 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RNF44	Q7L0R7	432 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C17orf82	Q86X59	251 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACOT4	Q8N9L9	421 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR9A4	Q8NGU2	314 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FANK1	Q8TC84	345 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HAVCR2	Q8TDQ0	301 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ACTR6	Q9GZN1	396 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LDAH	Q9H6V9	325 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	EVA1A	Q9H8M9	152 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ADAP2	Q9NPF8	381 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HPF1	Q9NWY4	346 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ING1	Q9UK53	422 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CAMK2A	Q9UQM7	478 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MRPS2	Q9Y399	296 aa	Known RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NPTN	Q9Y639	398 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PLXNB3	Q9ULL4	1909 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IGHV5-51	A0A0C4DH38	117 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		A0A0G2JPF8	293 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UNC119B	A6NIH7	251 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		A8MXK9	166 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HNRNPCL3	B7ZW38	293 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C4orf51	C9J302	202 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LINC01387	J3KSC0	135 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DNASE2	O00115	360 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GNB5	O14775	395 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PLPP2	O43688	288 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CTNS	O60931	367 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MTRF1	O75570	445 aa	Known RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RP2	O75695	350 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RLN2	P04090	185 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		P04436	131 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HNRNPCL4	P0DMR1	293 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SAG	P10523	405 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BMP7	P18075	431 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GRPR	P30550	384 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	S100A11	P31949	105 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR1D4	P47884	311 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SEC61A1	P61619	476 aa	Known RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ARG2	P78540	354 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF169	Q14929	603 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TOMM20	Q15388	145 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	METTL11B	Q5VVY1	283 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DCAF12L2	Q5VW00	463 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OVCH1	Q7RTY7	1134 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR4N5	Q8IXE1	308 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TMEM178A	Q8NBL3	297 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NUP43	Q8NFH3	380 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SMIM4	Q8WVI0	70 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KISS1R	Q969F8	398 aa	Predicted RBP	5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	POM121	Q96HA1	1249 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	AICDA	Q9GZX7	198 aa		5.16	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC6A20	Q9NP91	592 aa		5.16	□□□□□ -1.58

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