RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TCRBV5S2A0A599 114 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 ZNF99A8MXY4 864 aaPredicted RBP7.3□□□□□ -1.24
SPARC-208ENST00000538026 B2RBV5 119 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 ATP6V1G2-DDX39BF2Z307 99 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 hCG_2039718K7EN88 272 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 IMPA2O14732 288 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 ARPC2O15144 300 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 RNF13O43567 381 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 PTP4A3O75365 173 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 TRMUO75648 421 aaKnown RBP7.3□□□□□ -1.24
SPARC-208ENST00000538026 DCTN3O75935 186 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 HLA-HP01893 362 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 IGFBP1P08833 259 aaPredicted RBP7.3□□□□□ -1.24
SPARC-208ENST00000538026 CECR9P0C854 216 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 IFI30P13284 250 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 ATP6V1B2P21281 511 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 LIMS1P48059 325 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 CDH11P55287 796 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 IL1RL1Q01638 556 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 TGFBR3Q03167 851 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 DBPQ10586 325 aaPredicted RBP7.3□□□□□ -1.24
SPARC-208ENST00000538026 ST3GAL3Q11203 375 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 TRAM2Q15035 370 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 KLHL24Q6TFL4 600 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 DNM1P46Q6ZS02 220 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 TMPRSS11FQ6ZWK6 438 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 MBOAT2Q6ZWT7 520 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 MDP1Q86V88 176 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 IGFN1Q86VF2 1251 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 ZNF584Q8IVC4 421 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 SKA3Q8IX90 412 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 LRRC75A-AS1Q8N1F1 130 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 GPR137CQ8N3F9 429 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 FAM169BQ8N8A8 192 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 OR13C2Q8NGS9 318 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 LZICQ8WZA0 190 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 PIGTQ969N2 578 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 MCHR2Q969V1 340 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 BPIFA2Q96DR5 249 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 SLC25A44Q96H78 314 aaPredicted RBP7.3□□□□□ -1.24
SPARC-208ENST00000538026 MS4A3Q96HJ5 214 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 PYURFQ96I23 114 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 NSL1Q96IY1 281 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 CLPTM1LQ96KA5 538 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 HS6ST2Q96MM7 605 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 SMR3AQ99954 134 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 GSX1Q9H4S2 264 aaPredicted RBP7.3□□□□□ -1.24
SPARC-208ENST00000538026 NGBQ9NPG2 151 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 TAS2R1Q9NYW7 299 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 GDF2Q9UK05 429 aaPredicted RBP7.3□□□□□ -1.24
SPARC-208ENST00000538026 MOKQ9UQ07 419 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 MED31Q9Y3C7 131 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 V9GYQ6 96 aa7.3□□□□□ -1.24
SPARC-208ENST00000538026 FBN1P35555 2871 aaKnown RBP7.3□□□□□ -1.24
SPARC-208ENST00000538026 MALRD1Q5VYJ5 2156 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 A0A1W2PRQ8 180 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 TMEM129A0AVI4 362 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 TRIM64A6NGJ6 449 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 TRIM64BA6NI03 449 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 ZNF726A6NNF4 738 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 NDUFAB1O14561 156 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 SMPD2O60906 423 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 KRT33AO76009 404 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 SCG5P05408 212 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 QDPRP09417 244 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 UMPSP11172 480 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 HOXB1P14653 301 aaPredicted RBP7.29□□□□□ -1.24
SPARC-208ENST00000538026 B4GALT1P15291 398 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 CBR1P16152 277 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 ZNF14P17017 642 aaPredicted RBP7.29□□□□□ -1.24
SPARC-208ENST00000538026 RHCEP18577 417 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 TTKP33981 857 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 CDKN1AP38936 164 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 GPR4P46093 362 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 OMPP47874 163 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 CSNK1A1P48729 337 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 SH3BGRP55822 239 aaPredicted RBP7.29□□□□□ -1.24
SPARC-208ENST00000538026 MYBPC1Q00872 1141 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 NAAAQ02083 359 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 FMODQ06828 376 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 DGCR6Q14129 220 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 SWI5Q1ZZU3 235 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 Q5PR19 223 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 SAMD4BQ5PRF9 694 aaKnown RBP7.29□□□□□ -1.24
SPARC-208ENST00000538026 GKAP1Q5VSY0 366 aaPredicted RBP7.29□□□□□ -1.24
SPARC-208ENST00000538026 SLC22A25Q6T423 547 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 TMEM108Q6UXF1 575 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 THSD4Q6ZMP0 1018 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 FKBP9P1Q75LS8 142 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 SSX8Q7RTT4 187 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 NANOGNBQ7Z5D8 188 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 ZER1Q7Z7L7 766 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 SYT14Q8NB59 555 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 CCDC197Q8NCU1 140 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 OR51A7Q8NH64 312 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 ZNF519Q8TB69 540 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 ACOT11Q8WXI4 607 aaPredicted RBP7.29□□□□□ -1.24
SPARC-208ENST00000538026 FBXW5Q969U6 566 aa7.29□□□□□ -1.24
SPARC-208ENST00000538026 GTPBP3Q969Y2 492 aaKnown RBP7.29□□□□□ -1.24
SPARC-208ENST00000538026 SLC38A2Q96QD8 506 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms