RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 CDH15P55291 814 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 BIDP55957 195 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 PCBP3P57721 371 aaKnown RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 CCNIQ14094 377 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 SELPLGQ14242 412 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 MAD2L1BPQ15013 274 aaPredicted RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 FXNQ16595 210 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 TRMT5Q32P41 509 aaKnown RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 ZNF613Q6PF04 617 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 LRFN4Q6PJG9 635 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 RANBP3LQ86VV4 465 aaPredicted RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 TSPYL5Q86VY4 417 aaPredicted RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 RBM45Q8IUH3 476 aaKnown RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 ZNF584Q8IVC4 421 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 LRRC17Q8N6Y2 441 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 BHLHE22Q8NFJ8 381 aaPredicted RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 OR6T1Q8NGN1 323 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 OR5J2Q8NH18 312 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 LRRC8CQ8TDW0 803 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 TMEM54Q969K7 222 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 MS4A5Q9H3V2 200 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 EVA1AQ9H8M9 152 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 TAS2R5Q9NYW4 299 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 MYEF2Q9P2K5 600 aaKnown RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 TMEFF2Q9UIK5 374 aaPredicted RBP7.27□□□□□ -1.25
USP28-203ENST00000537490 FZR1Q9UM11 496 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 CORO2BQ9UQ03 480 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 ANGPT4Q9Y264 503 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 SPEF1Q9Y4P9 236 aa7.27□□□□□ -1.25
USP28-203ENST00000537490 CPSF4LA6NMK7 179 aaKnown RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 WNT9BO14905 357 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 CHP2O43745 196 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 FMO6PO60774 539 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 UBL3O95164 117 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 OR6A2O95222 327 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 RAB36O95755 333 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 MT-ATP6P00846 226 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 SERPINA5P05154 406 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 SRP14P37108 136 aaKnown RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 MTPNP58546 118 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 RBBP4Q09028 425 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 ZP4Q12836 540 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 MELKQ14680 651 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 ZNF74Q16587 644 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 ENTPD8Q5MY95 495 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 SWT1Q5T5J6 900 aaKnown RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 GKAP1Q5VSY0 366 aaPredicted RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 LIPNQ5VXI9 398 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 SLC35D2Q76EJ3 337 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 PIWIL3Q7Z3Z3 882 aaKnown RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 RETREG3Q86VR2 466 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 SNX32Q86XE0 403 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 C11orf65Q8NCR3 313 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 OR6X1Q8NH79 312 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 CLDND2Q8NHS1 167 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 VANGL1Q8TAA9 524 aaPredicted RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 YIPF5Q969M3 257 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 THOC1Q96FV9 657 aaKnown RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 CGREF1Q99674 301 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 DENND2DQ9H6A0 471 aaPredicted RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 GLTPQ9NZD2 209 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 DUSP13Q9UII6 198 aa7.26□□□□□ -1.25
USP28-203ENST00000537490 LEF1Q9UJU2 399 aaPredicted RBP7.26□□□□□ -1.25
USP28-203ENST00000537490 FAM157AC9JC47 383 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 KPNA4O00629 521 aaPredicted RBP7.25□□□□□ -1.25
USP28-203ENST00000537490 DHHO43323 396 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 RNF13O43567 381 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 NCR1O76036 304 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 CLPTM1O96005 669 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 C8BP07358 591 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 OR8G3PP0DMU2 310 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 NAT2P11245 290 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 CCL2P13500 99 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 ITGA2P17301 1181 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 CD247P20963 164 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 GPR6P46095 362 aaPredicted RBP7.25□□□□□ -1.25
USP28-203ENST00000537490 DVL1P1P54792 670 aaPredicted RBP7.25□□□□□ -1.25
USP28-203ENST00000537490 GALK2Q01415 458 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 CYP51A1Q16850 503 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 ALKBH6Q3KRA9 238 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 TTMPQ5BVD1 217 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 TTC33Q6PID6 262 aaPredicted RBP7.25□□□□□ -1.25
USP28-203ENST00000537490 DHDDSQ86SQ9 333 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 SLC22A24Q8N4F4 322 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 PAQR4Q8N4S7 273 aaPredicted RBP7.25□□□□□ -1.25
USP28-203ENST00000537490 RFLNBQ8N5W9 214 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 DPP10Q8N608 796 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 ADAMTS16Q8TE57 1224 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 RDH5Q92781 318 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 ZNF566Q969W8 418 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 TAMM41Q96BW9 452 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 SLC25A44Q96H78 314 aaPredicted RBP7.25□□□□□ -1.25
USP28-203ENST00000537490 TSPAN32Q96QS1 320 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 SH3GL3Q99963 347 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 PRSS27Q9BQR3 290 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 RACGAP1Q9H0H5 632 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 ZNF385DQ9H6B1 395 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 NARFLQ9H6Q4 476 aa7.25□□□□□ -1.25
USP28-203ENST00000537490 KAT8Q9H7Z6 458 aaKnown RBP7.25□□□□□ -1.25
USP28-203ENST00000537490 MEPEQ9NQ76 525 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms