RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 MITD1Q8WV92 249 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 MYDGFQ969H8 173 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.33□□□□□ -2.04
VBP1-203ENST00000535916 C8orf44Q96CB5 159 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 CXorf40BQ96DE9 158 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 PLEKHA8Q96JA3 519 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 IFT74Q96LB3 600 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 PANX2Q96RD6 677 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 TEKT3Q9BXF9 490 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 NAT10Q9H0A0 1025 aaKnown RBP2.33□□□□□ -2.04
VBP1-203ENST00000535916 OR51M1Q9H341 326 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 MARCH5Q9NX47 278 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 MTCH1Q9NZJ7 389 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 STOX2Q9P2F5 926 aaPredicted RBP2.33□□□□□ -2.04
VBP1-203ENST00000535916 SAMD4AQ9UPU9 718 aaKnown RBP2.33□□□□□ -2.04
VBP1-203ENST00000535916 L3MBTL1Q9Y468 752 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 MAP3K19Q56UN5 1328 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 USP47Q96K76 1375 aa2.33□□□□□ -2.04
VBP1-203ENST00000535916 IGLV4-60A0A075B6I1 120 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 KCNE1BA0A087WTH5 132 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 A0A1B0GUH1 482 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 A0A1W2PPV4 95 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 TCRBV9S1A1TA0A576 114 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 A8MXQ7 604 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 IDSB3KWA1 339 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 GFYI3L273 518 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 FCN1O00602 326 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 NVLO15381 856 aaKnown RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 RGS16O15492 202 aaPredicted RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 CHST1O43916 411 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 PRKYO43930 277 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 ICOSLGO75144 302 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 CABYRO75952 493 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 SUPT7LO94864 414 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 C1orf105O95561 183 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 SERPINE2P07093 398 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 GCFC2P16383 781 aaKnown RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 HSD17B2P37059 387 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 UQCRFS1P47985 274 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 DAP3P51398 398 aaKnown RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 PRKXP51817 358 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 NUP107P57740 925 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 YWHAGP61981 247 aaKnown RBP eCLIP2.32□□□□□ -2.04
VBP1-203ENST00000535916 EGFEM1PQ0D2K5 195 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 CUL1Q13616 776 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 KCNJ11Q14654 390 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 HNRNPA1L2Q32P51 320 aaKnown RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 CARD16Q5EG05 197 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 VTCN1Q7Z7D3 282 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 LINC00523Q86TU6 105 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 TMEM61Q8N0U2 210 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 SVOPLQ8N434 492 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 B3GNT7Q8NFL0 401 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 OR9G4Q8NGQ1 327 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 RHEBL1Q8TAI7 183 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 MRPS31Q92665 395 aaKnown RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 RAB1CQ92928 201 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 NEIL2Q969S2 332 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 CIDECQ96AQ7 238 aaPredicted RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 TMEM80Q96HE8 168 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 TMEM101Q96IK0 257 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 ZBED3Q96IU2 234 aaPredicted RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 ZNF641Q96N77 438 aaPredicted RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 SMIM14Q96QK8 99 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 CLCC1Q96S66 551 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 CYP2S1Q96SQ9 504 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 RNF2Q99496 336 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 GAL3ST1Q99999 423 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 FAIM2Q9BWQ8 316 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 IL22Q9GZX6 179 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 NHEJ1Q9H9Q4 299 aaPredicted RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 CHRAC1Q9NRG0 131 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 AGPAT3Q9NRZ7 376 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 LYARQ9NX58 379 aaKnown RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 BFARQ9NZS9 450 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 PHF11Q9UIL8 331 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 RIMS3Q9UJD0 308 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 NUP50Q9UKX7 468 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 NOSIPQ9Y314 301 aaKnown RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 MROH7-TTC4A0A0A0MT08 1334 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 MTCL1Q9Y4B5 1905 aaKnown RBP2.32□□□□□ -2.04
VBP1-203ENST00000535916 SLIT3O75094 1523 aa2.32□□□□□ -2.04
VBP1-203ENST00000535916 NSG1A0A0A6YYJ2 146 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 KBTBD11-OT1A0A1B0GTJ5 212 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 ZNF99A8MXY4 864 aaPredicted RBP2.31□□□□□ -2.04
VBP1-203ENST00000535916 TRDCB7Z8K6 153 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 K7ENP7 123 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 SULT2B1O00204 365 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 YKT6O15498 198 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 NMT2O60551 498 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 SCRG1O75711 98 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 CLPXO76031 633 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 GNA14O95837 355 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 IGKV1-17P01599 117 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 LGALS2P05162 132 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 CD55P08174 381 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 STAG3L2P0CL84 134 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 PRKACBP22694 351 aa2.31□□□□□ -2.04
VBP1-203ENST00000535916 GTF2E2P29084 291 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms