RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 ZDHHC11Q9H8X9 412 aa3.61□□□□□ -1.83
ECHDC1-223ENST00000534442 HOMER3Q9NSC5 361 aa3.61□□□□□ -1.83
ECHDC1-223ENST00000534442 CISHQ9NSE2 258 aa3.61□□□□□ -1.83
ECHDC1-223ENST00000534442 GAB2Q9UQC2 676 aa3.61□□□□□ -1.83
ECHDC1-223ENST00000534442 KLF13Q9Y2Y9 288 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-223ENST00000534442 MRPS18CQ9Y3D5 142 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-223ENST00000534442 TET2Q6N021 2002 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-223ENST00000534442 IGHV3-20A0A0C4DH32 117 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 A0A1W2PQ72 361 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 OR6C74A6NCV1 312 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 VSTM2BA6NLU5 285 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 H3BMH7 237 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 K7EQD1 137 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 TNFSF12O43508 249 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 KDELR3O43731 214 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 KLRC4O43908 158 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 AKR7A3O95154 331 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 NXPH4O95158 308 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 CTDNEP1O95476 244 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 EPPINO95925 133 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 IGHG3P01860 377 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 CXCR2P25025 360 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 ALDH3B1P43353 468 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 RPL27P61353 136 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 SNRPFP62306 86 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 DHODHQ02127 395 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 GABPB1Q06547 395 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 NME3Q13232 169 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 DPYSQ14117 519 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 TMEM187Q14656 261 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 RAB35Q15286 201 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 RFTN2Q52LD8 501 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 AGKQ53H12 422 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 FASTKD1Q53R41 847 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 LDLRAP1Q5SW96 308 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 ADAM5Q6NVV9 412 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 LCLAT1Q6UWP7 414 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 FAM159AQ6UWV7 190 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 FRRS1Q6ZNA5 592 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 NLRP9Q7RTR0 991 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 ZER1Q7Z7L7 766 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 GOLGA5Q8TBA6 731 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 RAB3IL1Q8TBN0 382 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 TMEM45BQ96B21 275 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 ECHDC3Q96DC8 303 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 PINK1Q9BXM7 581 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 FGFBP2Q9BYJ0 223 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 MED20Q9H944 212 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 IL1RAPQ9NPH3 570 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 SLC17A7Q9P2U7 560 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 KLK11Q9UBX7 282 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 CACNG5Q9UF02 275 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 BAIAP2L1Q9UHR4 511 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 C3orf18Q9UK00 162 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 BLOC1S6Q9UL45 172 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 KIAA1257Q9ULG3 409 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 AURKCQ9UQB9 309 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 KLHDC2Q9Y2U9 406 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 ATG4BQ9Y4P1 393 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 WIPI2Q9Y4P8 454 aa3.6□□□□□ -1.83
ECHDC1-223ENST00000534442 A0A1B0GX78 115 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 CLOCKO15516 846 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 NXPH2O95156 264 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 GUCA1CO95843 209 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 IFNB1P01574 187 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 APRTP07741 180 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 FHP07954 510 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 HIST1H2AGP0C0S8 130 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 ZSCAN5DPP0CG00 497 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 PRKACGP22612 351 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 PDHA2P29803 388 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 PKLRP30613 574 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 UGT2B10P36537 528 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 LONP1P36776 959 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 ACADSBP45954 432 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 MTIF2P46199 727 aaKnown RBP3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 PLGLB1Q02325 96 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 P2RY14Q15391 338 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 TRADDQ15628 312 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 DEFB110Q30KQ9 67 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 TMEM30BQ3MIR4 351 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 TCTEX1D4Q5JR98 221 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 BRMS1LQ5PSV4 323 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 LIPKQ5VXJ0 399 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 KDELC1Q6UW63 502 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 ZNF730Q6ZMV8 503 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 RUFY3Q7L099 469 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 C12orf56Q8IXR9 622 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 FAM71CQ8NEG0 241 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 ZNF519Q8TB69 540 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 M1APQ8TC57 530 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 ASZ1Q8WWH4 475 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 PHYHIPQ92561 330 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 HIST1H2ACQ93077 130 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 ISOC1Q96CN7 298 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 DNAJC19Q96DA6 116 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 FBXO17Q96EF6 278 aa3.59□□□□□ -1.83
ECHDC1-223ENST00000534442 KRT12Q99456 494 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms