RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TTC33Q6PID6 262 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-207ENST00000531727 IL17RELQ6ZVW7 336 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 RBM45Q8IUH3 476 aaKnown RBP14.51□□□□□ -0.09
CPSF1-207ENST00000531727 OR6X1Q8NH79 312 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 ADAMTS16Q8TE57 1224 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 UBASH3BQ8TF42 649 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 TMEM54Q969K7 222 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 MRPL24Q96A35 216 aaKnown RBP14.51□□□□□ -0.09
CPSF1-207ENST00000531727 FBXL3Q9UKT7 428 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 SPEF1Q9Y4P9 236 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 MALRD1Q5VYJ5 2156 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 SVEP1Q4LDE5 3571 aa14.51□□□□□ -0.09
CPSF1-207ENST00000531727 LRP5LA4QPB2 252 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 TRAPPC13A5PLN9 417 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 CH25HO95992 272 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 CD247P20963 164 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 GLRXP35754 106 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 GIPRP48546 466 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 CHN2P52757 468 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 MSMPQ1L6U9 139 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 SLC35D2Q76EJ3 337 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 PIWIL3Q7Z3Z3 882 aaKnown RBP14.5□□□□□ -0.09
CPSF1-207ENST00000531727 VANGL1Q8TAA9 524 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-207ENST00000531727 TAMM41Q96BW9 452 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 MPP4Q96JB8 637 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 SOX7Q9BT81 388 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 MRPL37Q9BZE1 423 aaKnown RBP14.5□□□□□ -0.09
CPSF1-207ENST00000531727 PCDHAC1Q9H158 963 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 TPK1Q9H3S4 243 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 NPHS2Q9NP85 383 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 NANSQ9NR45 359 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 TAS2R5Q9NYW4 299 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 GLTPQ9NZD2 209 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 SLC7A7Q9UM01 511 aa14.5□□□□□ -0.09
CPSF1-207ENST00000531727 SYNGR3O43761 229 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 LILRA1O75019 489 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 RIN1Q13671 783 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 FXNQ16595 210 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 INTS11Q5TA45 600 aaKnown RBP14.49□□□□□ -0.09
CPSF1-207ENST00000531727 TSPYL5Q86VY4 417 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-207ENST00000531727 SKA3Q8IX90 412 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 LRRC17Q8N6Y2 441 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 OR10A6Q8NH74 314 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 SLC26A7Q8TE54 656 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 HPS1Q92902 700 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 SIKE1Q9BRV8 207 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 ZNF426Q9BUY5 554 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 SLC19A3Q9BZV2 496 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 REV1Q9UBZ9 1251 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 ZNF229Q9UJW7 825 aa14.49□□□□□ -0.09
CPSF1-207ENST00000531727 M0R233 179 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 KPNA4O00629 521 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-207ENST00000531727 RNF13O43567 381 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 EDF1O60869 148 aaKnown RBP14.48□□□□□ -0.09
CPSF1-207ENST00000531727 ENTPD5O75356 428 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 HIST1H2ABP04908 130 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 IL2RGP31785 369 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 GZMMP51124 257 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 RPS23P62266 143 aaKnown RBP14.48□□□□□ -0.09
CPSF1-207ENST00000531727 GALK2Q01415 458 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 MELKQ14680 651 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 RAB39AQ14964 217 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 GKAP1Q5VSY0 366 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-207ENST00000531727 LRFN4Q6PJG9 635 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 CCDC80Q76M96 950 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 HIST3H2AQ7L7L0 130 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 SLC22A24Q8N4F4 322 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 FGFBP3Q8TAT2 258 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 RASSF5Q8WWW0 418 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 HIST1H2ACQ93077 130 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 ZNF566Q969W8 418 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 SLC25A44Q96H78 314 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-207ENST00000531727 SYT3Q9BQG1 590 aa14.48□□□□□ -0.09
CPSF1-207ENST00000531727 SERPINA5P05154 406 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 ASAH2BP0C7U1 165 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 PATE4P0C8F1 98 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 PGA4P0DJD7 388 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 PGA3P0DJD8 388 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 OR8G3PP0DMU2 310 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 UMPSP11172 480 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 APEX1P27695 318 aaKnown RBP14.47□□□□□ -0.09
CPSF1-207ENST00000531727 CRYBA2P53672 197 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 VMACQ2NL98 169 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 CR1LQ2VPA4 569 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 KRTAP24-1Q3LI83 254 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 METTL21CQ5VZV1 264 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 HDXQ7Z353 690 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 ZNF584Q8IVC4 421 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 SNX18Q96RF0 628 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 PRSS27Q9BQR3 290 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 MS4A5Q9H3V2 200 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 TMEM38BQ9NVV0 291 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 SLC7A8Q9UHI5 535 aa14.47□□□□□ -0.09
CPSF1-207ENST00000531727 A0A0G2JND7 137 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 LYNX1G3V0Z9 82 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 FBP2O00757 339 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 DHHO43323 396 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 VIMP08670 466 aaKnown RBP14.46□□□□□ -0.09
CPSF1-207ENST00000531727 LYNX1P0DP58 116 aa14.46□□□□□ -0.09
CPSF1-207ENST00000531727 LSP1P33241 339 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms