RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 ZNF74Q16587 644 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 TTC33Q6PID6 262 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC35D2Q76EJ3 337 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 PIWIL3Q7Z3Z3 882 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 RETREG3Q86VR2 466 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 RBM45Q8IUH3 476 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC30A8Q8IWU4 369 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 SKA3Q8IX90 412 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 OR6X1Q8NH79 312 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 ADAMTS16Q8TE57 1224 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 HPS1Q92902 700 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 TMEM54Q969K7 222 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 MRPL24Q96A35 216 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 THOC1Q96FV9 657 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 MAGEB18Q96M61 343 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 MRPL37Q9BZE1 423 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 KAT8Q9H7Z6 458 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 TAS2R5Q9NYW4 299 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 ZNF224Q9NZL3 707 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 REV1Q9UBZ9 1251 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 FBXL3Q9UKT7 428 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.14□□□□□ -0.79
CTNNA1-237ENST00000523275 TRAPPC13A5PLN9 417 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 HMGB1P1B2RPK0 211 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 M0R233 179 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 LILRA1O75019 489 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 ENTPD5O75356 428 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 UBL3O95164 117 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 THY1P04216 161 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 HIST1H2ABP04908 130 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 LSP1P33241 339 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 RPS23P62266 143 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 GALK2Q01415 458 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 RIN1Q13671 783 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 MSMPQ1L6U9 139 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 INTS11Q5TA45 600 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 GKAP1Q5VSY0 366 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 LRFN4Q6PJG9 635 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 WDR88Q6ZMY6 472 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 IL17RELQ6ZVW7 336 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 HIST3H2AQ7L7L0 130 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 LRRC17Q8N6Y2 441 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 OR4D11Q8NGI4 311 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 VANGL1Q8TAA9 524 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC26A7Q8TE54 656 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 HIST1H2ACQ93077 130 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 ZNF566Q969W8 418 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 TAMM41Q96BW9 452 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC25A44Q96H78 314 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 MPP4Q96JB8 637 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 SOX7Q9BT81 388 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC19A3Q9BZV2 496 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 TPK1Q9H3S4 243 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 ZNF385DQ9H6B1 395 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 NANSQ9NR45 359 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 GLTPQ9NZD2 209 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC7A7Q9UM01 511 aa10.13□□□□□ -0.79
CTNNA1-237ENST00000523275 LYNX1G3V0Z9 82 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 KPNA4O00629 521 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 RNF13O43567 381 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 SERPINA5P05154 406 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 VIMP08670 466 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 PATE4P0C8F1 98 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 OR8G3PP0DMU2 310 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 LYNX1P0DP58 116 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 CD247P20963 164 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 APEX1P27695 318 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 PCGF2P35227 344 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 CYLC2Q14093 348 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 RAB39AQ14964 217 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 FXNQ16595 210 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 CR1LQ2VPA4 569 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 KRTAP24-1Q3LI83 254 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 METTL21CQ5VZV1 264 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 UGT2A3Q6UWM9 527 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 SLC22A24Q8N4F4 322 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 OR10A6Q8NH74 314 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 FGFBP3Q8TAT2 258 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 RASSF5Q8WWW0 418 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 SNX18Q96RF0 628 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 SYT3Q9BQG1 590 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 SIKE1Q9BRV8 207 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 PCDHAC1Q9H158 963 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 NPHS2Q9NP85 383 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 ZNF229Q9UJW7 825 aa10.12□□□□□ -0.79
CTNNA1-237ENST00000523275 A0A0G2JND7 137 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 DHHO43323 396 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 FARS2O95363 451 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 BCL10O95999 233 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 QDPRP09417 244 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 ASAH2BP0C7U1 165 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 UMPSP11172 480 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 IL2RGP31785 369 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 ALDH3B1P43353 468 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 GZMMP51124 257 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 VMACQ2NL98 169 aa10.11□□□□□ -0.79
CTNNA1-237ENST00000523275 REP15Q6BDI9 236 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms