RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 HSPE1-MOB4S4R3N1 261 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 A0A0G2JK05 382 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 H3BSA7 217 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 BRI3O95415 125 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 TTC4O95801 387 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 HOXC4P09017 264 aaPredicted RBP6.48□□□□□ -1.37
CLK4-202ENST00000519132 CISD3P0C7P0 127 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 RPA2P15927 270 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 ADRA1AP35348 466 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 HSD17B3P37058 310 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 PTH2RP49190 550 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 RBP2P50120 134 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 FGF8P55075 233 aaPredicted RBP6.48□□□□□ -1.37
CLK4-202ENST00000519132 ISL1P61371 349 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 BLOC1S1P78537 153 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 RNF212Q495C1 297 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 SLC35D3Q5M8T2 416 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 ACSM5Q6NUN0 579 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 SCIMPQ6UWF3 145 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 IZUMO2Q6UXV1 221 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 CYHR1Q6ZMK1 362 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 SPRED1Q7Z699 444 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 VRK2Q86Y07 508 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 GBGT1Q8N5D6 347 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 CYB561A3Q8NBI2 242 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 STOML3Q8TAV4 291 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 SFT2D1Q8WV19 159 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 STMN2Q93045 179 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 TMBIM1Q969X1 311 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 CXorf58Q96LI9 332 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 KLHDC3Q9BQ90 382 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 PCBD2Q9H0N5 130 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 CDC42EP4Q9H3Q1 356 aaKnown RBP6.48□□□□□ -1.37
CLK4-202ENST00000519132 TMEM231Q9H6L2 316 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 PELI2Q9HAT8 420 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 LPAR2Q9HBW0 351 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 MOKQ9UQ07 419 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 TRIOBPQ9H2D6 2365 aa6.48□□□□□ -1.37
CLK4-202ENST00000519132 PLSCR5A0PG75 271 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 G3V2T6 193 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 SLC22A5O76082 557 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 MELTFP08582 738 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 ACSM4P0C7M7 580 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 ZNF250P15622 560 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 ZNF26P17031 533 aaPredicted RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 MAP2K4P45985 399 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 CSNK1EP49674 416 aaKnown RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 ATP5IP56385 69 aaPredicted RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 TAS2R38P59533 333 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 MTX3Q5HYI7 312 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 FNBP1LQ5T0N5 605 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 PRAMEF17Q5VTA0 474 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 LRRC66Q68CR7 880 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 PRR27Q6MZM9 219 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 UGT2A3Q6UWM9 527 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 OR2D3Q8NGH3 330 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 SH3YL1Q96HL8 342 aaPredicted RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 PPP3R2Q96LZ3 170 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 YTHDF1Q9BYJ9 559 aaKnown RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 GAREM1Q9H706 876 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 ABCG2Q9UNQ0 655 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 LOC285095A0A1B0GVY8 99 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 A0A1W2PP11 408 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 LRRC3CA6NJW4 275 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 PRMT5O14744 637 aaPredicted RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 PHYHO14832 338 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 DLEU1O43261 78 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 SNAP91O60641 907 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 PPBPP02775 128 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 GTF2E2P29084 291 aaKnown RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 CACNG1Q06432 222 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 PDIA2Q13087 525 aaKnown RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 HTR4Q13639 388 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 RUNX3Q13761 415 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 MPPED2Q15777 294 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 SLC27A4Q6P1M0 643 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 C16orf62Q7Z3J2 963 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 YRDCQ86U90 279 aaKnown RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 AMIGO1Q86WK6 493 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 CTAGE3PQ8IX95 158 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 ARRDC1Q8N5I2 433 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 FGF14Q92915 247 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 LMF2Q9BU23 707 aaKnown RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 TMEM109Q9BVC6 243 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 HIPK2Q9H2X6 1198 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 UBE2ZQ9H832 354 aaPredicted RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 RAB18Q9NP72 206 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 SIRT7Q9NRC8 400 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 SPHK1Q9NYA1 384 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 SLC17A7Q9P2U7 560 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 LHX3Q9UBR4 397 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 OPN4Q9UHM6 478 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 MRPS18CQ9Y3D5 142 aaKnown RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 RNF115Q9Y4L5 304 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 ZNF106Q9H2Y7 1883 aaKnown RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 hDV102S1A0JD36 115 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 OTOL1A6NHN0 477 aaPredicted RBP6.47□□□□□ -1.37
CLK4-202ENST00000519132 SERPINE3A8MV23 424 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 MBTPS2O43462 519 aa6.47□□□□□ -1.37
CLK4-202ENST00000519132 SPAG7O75391 227 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms