RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 DNASE1P24855 282 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 OR3A2P47893 321 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 RAP1BP61224 184 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 RAP1AP62834 184 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 SORDQ00796 357 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 NIPAL3Q6P499 406 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 ZNF620Q6ZNG0 422 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 TMEM179BQ7Z7N9 219 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 MEX3DQ86XN8 651 aaKnown RBP17.82■□□□□ 0.44
USP53-208ENST00000514305 EPHX4Q8IUS5 362 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 OR6X1Q8NH79 312 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 MOSPD2Q8NHP6 518 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 TEX47Q8TBZ9 253 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 EME1Q96AY2 570 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 ZNF775Q96BV0 537 aaPredicted RBP17.82■□□□□ 0.44
USP53-208ENST00000514305 GPX7Q96SL4 187 aaPredicted RBP17.82■□□□□ 0.44
USP53-208ENST00000514305 GABARAPL1Q9H0R8 117 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 C12orf49Q9H741 205 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 PAPOLBQ9NRJ5 636 aaKnown RBP17.82■□□□□ 0.44
USP53-208ENST00000514305 IL20Q9NYY1 176 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 ING1Q9UK53 422 aaPredicted RBP17.82■□□□□ 0.44
USP53-208ENST00000514305 OAZ3Q9UMX2 235 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 BAIAP2Q9UQB8 552 aa17.82■□□□□ 0.44
USP53-208ENST00000514305 FAM221AA4D161 298 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 SAC3D1A6NKF1 404 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 H3BN98 237 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 XKRYO14609 159 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 IMPA2O14732 288 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 TRAF3IP2O43734 574 aaPredicted RBP17.81■□□□□ 0.44
USP53-208ENST00000514305 OSMP13725 252 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 ANPEPP15144 967 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 IFNGR1P15260 489 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 PRKACGP22612 351 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 NOS3P29474 1203 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 RPL27P61353 136 aaKnown RBP17.81■□□□□ 0.44
USP53-208ENST00000514305 VWA1Q6PCB0 445 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 NUFIP2Q7Z417 695 aaKnown RBP17.81■□□□□ 0.44
USP53-208ENST00000514305 BTLAQ7Z6A9 289 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 CDC20BQ86Y33 519 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 UBE2J2Q8N2K1 259 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 ZIC4Q8N9L1 334 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 ZNF566Q969W8 418 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 SLC25A44Q96H78 314 aaPredicted RBP17.81■□□□□ 0.44
USP53-208ENST00000514305 LRR1Q96L50 414 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 ZNF385AQ96PM9 386 aaKnown RBP17.81■□□□□ 0.44
USP53-208ENST00000514305 GPA33Q99795 319 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 SLCO5A1Q9H2Y9 848 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 KRT84Q9NSB2 600 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 ELOVL5Q9NYP7 299 aa17.81■□□□□ 0.44
USP53-208ENST00000514305 ITPR3Q14573 2671 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 AKAP6Q13023 2319 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 SLC35F4A4IF30 521 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 AHCYL1O43865 530 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 HPRP00739 348 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 IGHG1P01857 330 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 IGHMP01871 453 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 EPXP11678 715 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 RAD23AP54725 363 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 BIDP55957 195 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 DAZAP2Q15038 168 aaPredicted RBP17.8■□□□□ 0.44
USP53-208ENST00000514305 ACKR1Q16570 336 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 FBXW9Q5XUX1 488 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 FAHD1Q6P587 224 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 ZBTB49Q6ZSB9 765 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 GPR137CQ8N3F9 429 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 NIPSNAP1Q9BPW8 284 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 USB1Q9BQ65 265 aaKnown RBP17.8■□□□□ 0.44
USP53-208ENST00000514305 KATNB1Q9BVA0 655 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 IFT27Q9BW83 186 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 LINC00470Q9BZP3 86 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 CXXC4Q9H2H0 198 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 LIME1Q9H400 295 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 TBC1D23Q9NUY8 699 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 MED12LQ86YW9 2145 aa17.8■□□□□ 0.44
USP53-208ENST00000514305 A8MXE2 369 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 HLA-DOBP13765 273 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 CD99P14209 185 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 SDHAP31040 664 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 PCYT1AP49585 367 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 CLRN1P58418 232 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 ESRRGP62508 458 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 TGFBR3Q03167 851 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 HS3ST5Q8IZT8 346 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 PARP8Q8N3A8 854 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 OR2T33Q8NG76 320 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 OR6N1Q8NGY5 312 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 SAMD8Q96LT4 415 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 ZNF570Q96NI8 536 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 RBM24Q9BX46 236 aaKnown RBP17.79■□□□□ 0.44
USP53-208ENST00000514305 HDHD5Q9BXW7 423 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 PRRG3Q9BZD7 231 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 VCXQ9H320 206 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 NRIP3Q9NQ35 241 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 ASB6Q9NWX5 421 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 MED29Q9NX70 200 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 JKAMPQ9P055 326 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 ZNF346Q9UL40 294 aaKnown RBP17.79■□□□□ 0.44
USP53-208ENST00000514305 PLEKHA6Q9Y2H5 1048 aa17.79■□□□□ 0.44
USP53-208ENST00000514305 HRNRQ86YZ3 2850 aaPredicted RBP17.78■□□□□ 0.44
USP53-208ENST00000514305 ARPC3O15145 178 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms