RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 NFYCQ13952 458 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 ZNF74Q16587 644 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 SLC35D2Q76EJ3 337 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 RETREG3Q86VR2 466 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 SLC26A7Q8TE54 656 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 ADAMTS16Q8TE57 1224 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 TMEM54Q969K7 222 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 MRPL24Q96A35 216 aaKnown RBP17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 PCDHAC1Q9H158 963 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 CHODLQ9H9P2 273 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 MRGBPQ9NV56 204 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 GLTPQ9NZD2 209 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 ZNF229Q9UJW7 825 aa17.23■□□□□ 0.35
UBE2D3-220ENST00000505307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■■■■□ 19.8
UBE2D3-220ENST00000505307 SH3PXD2BA1X283 911 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 CPSF4LA6NMK7 179 aaKnown RBP17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 C11orf98E9PRG8 122 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 SERPINI2O75830 405 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 TGFAP01135 160 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 OPN1SWP03999 348 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 HIST1H2ABP04908 130 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 ADRA2AP08913 450 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 GIPRP48546 466 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 PTDSS1P48651 473 aaKnown RBP17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 GALK2Q01415 458 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 NPTX1Q15818 432 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 FAM120AOSQ5T036 256 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 REP15Q6BDI9 236 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 HIST3H2AQ7L7L0 130 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 DPPA2Q7Z7J5 298 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 CDK20Q8IZL9 346 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 HIST1H2ACQ93077 130 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 ZNF566Q969W8 418 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 SLC25A44Q96H78 314 aaPredicted RBP17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 MS4A3Q96HJ5 214 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 SH3GL1Q99961 368 aa17.22■□□□□ 0.35
UBE2D3-220ENST00000505307 M0R233 179 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 RNF13O43567 381 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 CH25HO95992 272 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 OR8G3PP0DMU2 310 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 CD247P20963 164 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 CYLC2Q14093 348 aaPredicted RBP17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 SELPLGQ14242 412 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 GKAP1Q5VSY0 366 aaPredicted RBP17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 HDXQ7Z353 690 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 ZCCHC24Q8N2G6 241 aaKnown RBP17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 ARIH2OSQ8N7S6 290 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 ZNF426Q9BUY5 554 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 VIPAS39Q9H9C1 493 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 TAS2R5Q9NYW4 299 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 ZNF224Q9NZL3 707 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 REV1Q9UBZ9 1251 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 SLC7A7Q9UM01 511 aa17.21■□□□□ 0.35
UBE2D3-220ENST00000505307 EDF1O60869 148 aaKnown RBP17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 LYPD3O95274 346 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 FARS2O95363 451 aaKnown RBP17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 SERPINA5P05154 406 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 RIN1Q13671 783 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 VMACQ2NL98 169 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 WDR88Q6ZMY6 472 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 CCDC80Q76M96 950 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 WDFY1Q8IWB7 410 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 SLC22A24Q8N4F4 322 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 OR10A6Q8NH74 314 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 VANGL1Q8TAA9 524 aaPredicted RBP17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 TAMM41Q96BW9 452 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 MRPL37Q9BZE1 423 aaKnown RBP17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 NPHS2Q9NP85 383 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 SLC7A8Q9UHI5 535 aa17.2■□□□□ 0.34
UBE2D3-220ENST00000505307 SLC22A23A1A5C7 686 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 MGRN1O60291 552 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 LILRA1O75019 489 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 BCL10O95999 233 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 THY1P04216 161 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 IGFBP1P08833 259 aaPredicted RBP17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 ASAH2BP0C7U1 165 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 FXNQ16595 210 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 NRN1LQ496H8 165 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 HDDC2Q7Z4H3 204 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 RBM45Q8IUH3 476 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 SKA3Q8IX90 412 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 LINC01356Q8N9X3 169 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 OR4D11Q8NGI4 311 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 THOC1Q96FV9 657 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 POLR2J2Q9GZM3 115 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 POLR2J3Q9H1A7 115 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 C1orf198Q9H425 327 aa17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 ZNF346Q9UL40 294 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-220ENST00000505307 A0A0G2JND7 137 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 LRP5LA4QPB2 252 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 CENPBD1B2RD01 187 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 DHHO43323 396 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 NPPAP01160 153 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 PTHP01270 115 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 IGF2P01344 180 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 IGHG1P01857 330 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 UMPSP11172 480 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 APEX1P27695 318 aaKnown RBP17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 RAB39AQ14964 217 aa17.18■□□□□ 0.34
UBE2D3-220ENST00000505307 LRFN4Q6PJG9 635 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms