RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 GMFBP60983 142 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 RAB4BP61018 213 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 RPL38P63173 70 aaKnown RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 SELENOWP63302 87 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 VLDLRP98155 873 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 REEP5Q00765 189 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 KRTAP1-1Q07627 177 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 C2orf80Q0P641 193 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 LAPTM5Q13571 262 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 GTF2H2Q13888 395 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 IL18Q14116 193 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 FGFBP1Q14512 234 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SLC10A1Q14973 349 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TOMM20Q15388 145 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SNAPC1Q16533 368 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MICBQ29980 383 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CDNFQ49AH0 187 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 PDLIM3Q53GG5 364 aaPredicted RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 FAM76BQ5HYJ3 339 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SPANXN4Q5MJ08 99 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ELFN2Q5R3F8 820 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 RIPPLY2Q5TAB7 128 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 LIPNQ5VXI9 398 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 HBMQ6B0K9 141 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 H3F3CQ6NXT2 135 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 GTF2H2CQ6P1K8 395 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CNIH2Q6PI25 160 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SEZ6L2Q6UXD5 910 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CASP12Q6UXS9 341 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CD300LDQ6UXZ3 194 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ZNF600Q6ZNG1 722 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 RASSF6Q6ZTQ3 369 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 BTN2A1Q7KYR7 527 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SHFQ7M4L6 423 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 LRRC70Q7Z2Q7 622 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MILR1Q7Z6M3 343 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 LHFPL3Q86UP9 236 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ZNF227Q86WZ6 799 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SPAG16Q8N0X2 631 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SPATA6LQ8N4H0 392 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MFSD9Q8NBP5 474 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ZNF740Q8NDX6 193 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 BVESQ8NE79 360 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ATP6V1C2Q8NEY4 427 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 OR2M7Q8NG81 312 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 OR4D10Q8NGI6 311 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 OR6M1Q8NGM8 313 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 OR6S1Q8NH40 331 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 OR8K3Q8NH51 312 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 NT5CQ8TCD5 201 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TSLPQ969D9 159 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 NEIL2Q969S2 332 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MARC2Q969Z3 335 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SARAFQ96BY9 339 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 PEX11GQ96HA9 241 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 RBP7Q96R05 134 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 OR1F2PQ96R84 312 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 KCNA7Q96RP8 456 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 FEVQ99581 238 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MNTQ99583 582 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 C12orf57Q99622 126 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 PIP5K1AQ99755 562 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 GAL3ST1Q99999 423 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SEC22CQ9BRL7 303 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TEX12Q9BXU0 123 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TTTY12Q9BZ98 90 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 RHBGQ9H310 441 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 TMEM38AQ9H6F2 299 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CHODLQ9H9P2 273 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 GPN1Q9HCN4 374 aaPredicted RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 FGF20Q9NP95 211 aaPredicted RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 SERHLQ9NQF3 203 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 CYSLTR2Q9NS75 346 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 LANCL2Q9NS86 450 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 KLHL28Q9NXS3 571 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ARL15Q9NXU5 204 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 VNN3Q9NY84 501 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ZNF226Q9NYT6 803 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 SLAMF8Q9P0V8 285 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 NLKQ9UBE8 527 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 MLXQ9UH92 298 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 FOXD3Q9UJU5 478 aaPredicted RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 SLC6A5Q9Y345 797 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 OARD1Q9Y530 152 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 NPFFR2Q9Y5X5 522 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 ATRQ13535 2644 aa4.66□□□□□ -1.66
HTT-202ENST00000502820 NCOA6Q14686 2063 aaPredicted RBP4.66□□□□□ -1.66
HTT-202ENST00000502820 PCM1Q15154 2024 aa4.65□□□□□ -1.66
HTT-202ENST00000502820 AKAP6Q13023 2319 aa4.65□□□□□ -1.66
HTT-202ENST00000502820 A0A0A6YYJ9 748 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 A0A0G2JMM0 328 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 A0A1W2PPB8 328 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 A0A1W2PRB8 838 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 A0A1W2PRS3 328 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 RAB19A4D1S5 217 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 OR14I1A6ND48 311 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 NPEPPSL1A6NEC2 478 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 KIR3DP1A8MWS1 328 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 C4orf51C9J302 202 aa4.65□□□□□ -1.67
HTT-202ENST00000502820 L7N2F9 121 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms