RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 NPTX1Q15818 432 aa14.79□□□□□ -0.04
SMC4-226ENST00000497311 TTC33Q6PID6 262 aaPredicted RBP14.79□□□□□ -0.04
SMC4-226ENST00000497311 SLC30A8Q8IWU4 369 aa14.79□□□□□ -0.04
SMC4-226ENST00000497311 GPR32P1Q8NGA4 272 aa14.79□□□□□ -0.04
SMC4-226ENST00000497311 MRPL24Q96A35 216 aaKnown RBP14.79□□□□□ -0.04
SMC4-226ENST00000497311 THOC1Q96FV9 657 aaKnown RBP14.79□□□□□ -0.04
SMC4-226ENST00000497311 MRPL37Q9BZE1 423 aaKnown RBP14.79□□□□□ -0.04
SMC4-226ENST00000497311 ZNF224Q9NZL3 707 aa14.79□□□□□ -0.04
SMC4-226ENST00000497311 SYNGR3O43761 229 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 EDF1O60869 148 aaKnown RBP14.78□□□□□ -0.04
SMC4-226ENST00000497311 CH25HO95992 272 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 IGFBP1P08833 259 aaPredicted RBP14.78□□□□□ -0.04
SMC4-226ENST00000497311 GLRXP35754 106 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 GALK2Q01415 458 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 ZP4Q12836 540 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 ZNF74Q16587 644 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 GKAP1Q5VSY0 366 aaPredicted RBP14.78□□□□□ -0.04
SMC4-226ENST00000497311 SLC35D2Q76EJ3 337 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 PIWIL3Q7Z3Z3 882 aaKnown RBP14.78□□□□□ -0.04
SMC4-226ENST00000497311 PATL1Q86TB9 770 aaKnown RBP14.78□□□□□ -0.04
SMC4-226ENST00000497311 RETREG3Q86VR2 466 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 OR6X1Q8NH79 312 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 VANGL1Q8TAA9 524 aaPredicted RBP14.78□□□□□ -0.04
SMC4-226ENST00000497311 SLC26A7Q8TE54 656 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 ADAMTS16Q8TE57 1224 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 TSPEARQ8WU66 669 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 SOX7Q9BT81 388 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 TPK1Q9H3S4 243 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 NANSQ9NR45 359 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 TAS2R5Q9NYW4 299 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 GLTPQ9NZD2 209 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 FBXL3Q9UKT7 428 aa14.78□□□□□ -0.04
SMC4-226ENST00000497311 TRAPPC13A5PLN9 417 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 M0R233 179 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 RNF13O43567 381 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 LILRA1O75019 489 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 ENTPD5O75356 428 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 THY1P04216 161 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 LSP1P33241 339 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 RPS23P62266 143 aaKnown RBP14.77□□□□□ -0.05
SMC4-226ENST00000497311 NFYCQ13952 458 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 MSMPQ1L6U9 139 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 HSP90B2PQ58FF3 399 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 WDR88Q6ZMY6 472 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 RBM45Q8IUH3 476 aaKnown RBP14.77□□□□□ -0.05
SMC4-226ENST00000497311 OR4D11Q8NGI4 311 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 HPS1Q92902 700 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 TMEM54Q969K7 222 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 ZNF566Q969W8 418 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 MPP4Q96JB8 637 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 MS4A5Q9H3V2 200 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 ZNF385DQ9H6B1 395 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 KAT8Q9H7Z6 458 aaKnown RBP14.77□□□□□ -0.05
SMC4-226ENST00000497311 MED4Q9NPJ6 270 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 REV1Q9UBZ9 1251 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 ZNF229Q9UJW7 825 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 SLC7A7Q9UM01 511 aa14.77□□□□□ -0.05
SMC4-226ENST00000497311 LYNX1G3V0Z9 82 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 KPNA4O00629 521 aaPredicted RBP14.76□□□□□ -0.05
SMC4-226ENST00000497311 LYPD3O95274 346 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 HIST1H2ABP04908 130 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 VIMP08670 466 aaKnown RBP14.76□□□□□ -0.05
SMC4-226ENST00000497311 LYNX1P0DP58 116 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 CD247P20963 164 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 APEX1P27695 318 aaKnown RBP14.76□□□□□ -0.05
SMC4-226ENST00000497311 RIN1Q13671 783 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 RAB39AQ14964 217 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 CR1LQ2VPA4 569 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 KRTAP24-1Q3LI83 254 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 INTS11Q5TA45 600 aaKnown RBP14.76□□□□□ -0.05
SMC4-226ENST00000497311 HIST3H2AQ7L7L0 130 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 SKA3Q8IX90 412 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 SLC22A24Q8N4F4 322 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 OR10A6Q8NH74 314 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 RASSF5Q8WWW0 418 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 HIST1H2ACQ93077 130 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 SLC25A44Q96H78 314 aaPredicted RBP14.76□□□□□ -0.05
SMC4-226ENST00000497311 SNX18Q96RF0 628 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 SYT3Q9BQG1 590 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 SIKE1Q9BRV8 207 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 SLC19A3Q9BZV2 496 aa14.76□□□□□ -0.05
SMC4-226ENST00000497311 ATP8B1O43520 1251 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 SERPINA5P05154 406 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 PATE4P0C8F1 98 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 OR8G3PP0DMU2 310 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 UMPSP11172 480 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 IL2RGP31785 369 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 PCGF2P35227 344 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 MELKQ14680 651 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 FXNQ16595 210 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 LRFN4Q6PJG9 635 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 UGT2A3Q6UWM9 527 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 LRRC17Q8N6Y2 441 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 LINC01356Q8N9X3 169 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 TAMM41Q96BW9 452 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 PCDHAC1Q9H158 963 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 NPHS2Q9NP85 383 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 SLC7A8Q9UHI5 535 aa14.75□□□□□ -0.05
SMC4-226ENST00000497311 DHHO43323 396 aa14.74□□□□□ -0.05
SMC4-226ENST00000497311 FARS2O95363 451 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms