RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 NUP214P35658 2090 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-212ENST00000492407 A0A1B0GWJ7 208 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 AIM2O14862 343 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 SHOX2O60902 331 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-212ENST00000492407 CLN5O75503 358 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 UPK3AO75631 287 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 ANP32DO95626 131 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 C1QCP02747 245 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 BCHEP06276 602 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 CECR9P0C854 216 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 GKN3PP0CG01 181 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 ETS2P15036 469 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 PRKACAP17612 351 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 IGFBP5P24593 272 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 GTF2E2P29084 291 aaKnown RBP7.92□□□□□ -1.14
HDAC3-212ENST00000492407 EPHA3P29320 983 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 MRPL19P49406 292 aaKnown RBP7.92□□□□□ -1.14
HDAC3-212ENST00000492407 CHN2P52757 468 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 NME5P56597 212 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 FADDQ13158 208 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 MPP2Q14168 576 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 KRTAP24-1Q3LI83 254 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 IQCCQ4KMZ1 466 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF311Q5JNZ3 666 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 FAM69AQ5T7M9 428 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 FAM91A1Q658Y4 838 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF627Q7L945 461 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 AKAP14Q86UN6 197 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 STX12Q86Y82 276 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 CLIP4Q8N3C7 705 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 RFLNBQ8N5W9 214 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 PIK3C3Q8NEB9 887 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 BHLHE22Q8NFJ8 381 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-212ENST00000492407 BBS10Q8TAM1 723 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 DNAJA4Q8WW22 397 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-212ENST00000492407 SLC38A4Q969I6 547 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 TMEM19Q96HH6 336 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 VRK1Q99986 396 aaPredicted RBP7.92□□□□□ -1.14
HDAC3-212ENST00000492407 C9orf16Q9BUW7 83 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 PTDSS2Q9BVG9 487 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 C12orf4Q9NQ89 552 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 FBXL3Q9UKT7 428 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 USP22Q9UPT9 525 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 CORINQ9Y5Q5 1042 aa7.92□□□□□ -1.14
HDAC3-212ENST00000492407 PLCE1Q9P212 2302 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 IGHV4-61A0A0C4DH41 118 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 ACOD1A6NK06 481 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 NOTOA8MTQ0 251 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 CENPBD1B2RD01 187 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 LY6HO94772 140 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 TGFAP01135 160 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 PRG2P13727 222 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 ETFAP13804 333 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 DAOP14920 347 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 POLR2JP52435 117 aaKnown RBP7.91□□□□□ -1.14
HDAC3-212ENST00000492407 CSNK2BP67870 215 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 ARF1P84077 181 aaKnown RBP7.91□□□□□ -1.14
HDAC3-212ENST00000492407 HGFACQ04756 655 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 EGR4Q05215 589 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 BNIP2Q12982 314 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 C1DQ13901 141 aaKnown RBP7.91□□□□□ -1.14
HDAC3-212ENST00000492407 RGNQ15493 299 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 REP15Q6BDI9 236 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 H1FNTQ75WM6 255 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-212ENST00000492407 LINGO2Q7L985 606 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 SERPINA11Q86U17 422 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 COMTD1Q86VU5 262 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 GPR137CQ8N3F9 429 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 ARIH2OSQ8N7S6 290 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 PNPT1Q8TCS8 783 aaKnown RBP7.91□□□□□ -1.14
HDAC3-212ENST00000492407 SLC26A7Q8TE54 656 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 SLC41A3Q96GZ6 507 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 ALKBH3Q96Q83 286 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-212ENST00000492407 SPATA5L1Q9BVQ7 753 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 C19orf24Q9BVV8 132 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 BPESC1Q9GZL8 116 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 NELFAQ9H3P2 528 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 MS4A5Q9H3V2 200 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 WDR55Q9H6Y2 383 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-212ENST00000492407 GPR35Q9HC97 309 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 SLC6A13Q9NSD5 602 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 B3GAT1Q9P2W7 334 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 RPS6KB2Q9UBS0 482 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 RAB21Q9UL25 225 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 CHST2Q9Y4C5 530 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 SPEF1Q9Y4P9 236 aa7.91□□□□□ -1.14
HDAC3-212ENST00000492407 ANK2Q01484 3957 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 TRAV36DV7A0A075B6V5 113 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 A0A096LPE4 126 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 A0A0A6YYJ9 748 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 IGHV2OR16-5A0A0B4J2B6 119 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 A0A1W2PPZ6 126 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 SLC35F4A4IF30 521 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 PRORSD1PA6NEY8 169 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 ZNF99A8MXY4 864 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-212ENST00000492407 C5orf58C9J3I9 102 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 hCG_2039718K7EN88 272 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 NR5A2O00482 541 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 UBDO15205 165 aa7.9□□□□□ -1.14
HDAC3-212ENST00000492407 ENTPD5O75356 428 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms