RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SLC35D2Q76EJ3 337 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 HDXQ7Z353 690 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 DPPA2Q7Z7J5 298 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 SKA3Q8IX90 412 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 PHC2Q8IXK0 858 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 CDK20Q8IZL9 346 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 ZCCHC24Q8N2G6 241 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 SVOPLQ8N434 492 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 PIP4P2Q8N4L2 257 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 LRRC17Q8N6Y2 441 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 ARIH2OSQ8N7S6 290 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 OR8J3Q8NGG0 315 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 OR10A6Q8NH74 314 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 FGFBP3Q8TAT2 258 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 RASSF5Q8WWW0 418 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 TMEM158Q8WZ71 300 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 NMD3Q96D46 503 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 SLC25A44Q96H78 314 aaPredicted RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 MS4A3Q96HJ5 214 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 ZNF583Q96ND8 569 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 VRK1Q99986 396 aaPredicted RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 SOX7Q9BT81 388 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 BEX2Q9BXY8 128 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 POLR2J2Q9GZM3 115 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 RACGAP1Q9H0H5 632 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 POLR2J3Q9H1A7 115 aaKnown RBP7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 NANSQ9NR45 359 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 TMEM38BQ9NVV0 291 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 GLTPQ9NZD2 209 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 SLC13A4Q9UKG4 626 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 FBXL3Q9UKT7 428 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 CMAHPQ9Y471 501 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 SVEP1Q4LDE5 3571 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 WNK2Q9Y3S1 2297 aa7.21□□□□□ -1.26
SMARCB1-207ENST00000491967 IGLV3-9A0A075B6K5 115 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 LOC100289279A0A1B0GTE1 492 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 HTR3EA5X5Y0 456 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 NPIPB13A6NJU9 1138 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 RNF212BA8MTL3 300 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 NPIPB4C9JG80 1138 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 ANGPT2O15123 496 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 PHF1O43189 567 aaPredicted RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 DHHO43323 396 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 SYNGR3O43761 229 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 SEC14L2O76054 403 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 UBL3O95164 117 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 CH25HO95992 272 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 MT-ND1P03886 318 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 OPN1SWP03999 348 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 ADRA2AP08913 450 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 OR8G3PP0DMU2 310 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 APEHP13798 732 aaKnown RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 B4GALT1P15291 398 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 ZNF16P17020 682 aaPredicted RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 AHCYP23526 432 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 RBM34P42696 430 aaKnown RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 GIPRP48546 466 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 CSNK1A1P48729 337 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 BIDP55957 195 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 RAB1AP62820 205 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 NPRL3Q12980 569 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 SNTB2Q13425 540 aaKnown RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 NFYCQ13952 458 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 CYLC2Q14093 348 aaPredicted RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 GGTLC2Q14390 218 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 TRMT5Q32P41 509 aaKnown RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 ELFN2Q5R3F8 820 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 FAM120AOSQ5T036 256 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 FAM166AQ6J272 317 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 TTC33Q6PID6 262 aaPredicted RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 VHLLQ6RSH7 139 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 SPATA21Q7Z572 469 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 SLC22A24Q8N4F4 322 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 OR6N1Q8NGY5 312 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 UBASH3BQ8TF42 649 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 DYDC1Q8WWB3 177 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 LRRC58Q96CX6 371 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 SH3GL1Q99961 368 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 MRPL37Q9BZE1 423 aaKnown RBP7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 ULBP2Q9BZM5 246 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 SHARPINQ9H0F6 387 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 MS4A5Q9H3V2 200 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 NPHS2Q9NP85 383 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 MRGBPQ9NV56 204 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 REV1Q9UBZ9 1251 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 SLC7A7Q9UM01 511 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 POFUT2Q9Y2G5 429 aa7.2□□□□□ -1.26
SMARCB1-207ENST00000491967 CPSF4LA6NMK7 179 aaKnown RBP7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 ENTPD5O75356 428 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 SASH3O75995 380 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 OR5F1O95221 314 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 SNAP29O95721 258 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 ERCC1P07992 297 aaPredicted RBP7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 MMP7P09237 267 aaPredicted RBP7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 THRBP10828 461 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 CD79AP11912 226 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 ZNF250P15622 560 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 IL2RGP31785 369 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 CHN2P52757 468 aa7.19□□□□□ -1.26
SMARCB1-207ENST00000491967 UGT2B15P54855 530 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms