RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PRKCDQ05655 676 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 MELKQ14680 651 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 LAPTM4AQ15012 233 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 TRAM2Q15035 370 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 KRTAP21-3Q3LHN1 58 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 Q5PR19 223 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 ARMC4Q5T2S8 1044 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 TBPL2Q6SJ96 375 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 SLC22A25Q6T423 547 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 MEX3DQ86XN8 651 aaKnown RBP12.36□□□□□ -0.43
COL9A2-208ENST00000488463 NRMQ8IXM6 262 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 LRRC75AQ8NAA5 344 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 SLC7A13Q8TCU3 470 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 ASB10Q8WXI3 467 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 ACOT11Q8WXI4 607 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-208ENST00000488463 NMD3Q96D46 503 aaKnown RBP12.36□□□□□ -0.43
COL9A2-208ENST00000488463 BPIFA2Q96DR5 249 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 SLC25A44Q96H78 314 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-208ENST00000488463 DHRS1Q96LJ7 313 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 SLC38A2Q96QD8 506 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 CDRT15Q96T59 188 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 DHRS9Q9BPW9 319 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 FUZQ9BT04 418 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 NMNAT1Q9HAN9 279 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-208ENST00000488463 GLTPQ9NZD2 209 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 RPS6KA6Q9UK32 745 aa12.36□□□□□ -0.43
COL9A2-208ENST00000488463 FN1P02751 2386 aaKnown RBP12.35□□□□□ -0.43
COL9A2-208ENST00000488463 SONP18583 2426 aaKnown RBP12.35□□□□□ -0.43
COL9A2-208ENST00000488463 HIST1H2ABP04908 130 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 CECR9P0C854 216 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 IFI30P13284 250 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 CBR1P16152 277 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF26P17031 533 aaPredicted RBP12.35□□□□□ -0.43
COL9A2-208ENST00000488463 TCN1P20061 433 aaPredicted RBP12.35□□□□□ -0.43
COL9A2-208ENST00000488463 PAX7P23759 505 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 CALCRP30988 508 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 TTKP33981 857 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF133P52736 654 aaPredicted RBP12.35□□□□□ -0.43
COL9A2-208ENST00000488463 SAMD4BQ5PRF9 694 aaKnown RBP12.35□□□□□ -0.43
COL9A2-208ENST00000488463 KLHL24Q6TFL4 600 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 MBOAT2Q6ZWT7 520 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 FKBP9P1Q75LS8 142 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 HIST3H2AQ7L7L0 130 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 TRPM8Q7Z2W7 1104 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 DEFB107AQ8IZN7 70 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 RNF113BQ8IZP6 322 aaKnown RBP12.35□□□□□ -0.43
COL9A2-208ENST00000488463 OR6N1Q8NGY5 312 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 HIST1H2ACQ93077 130 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 FNDC11Q9BVV2 318 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 ULBP2Q9BZM5 246 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 ANKRD19PQ9H560 264 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 CXorf56Q9H5V9 222 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 MOKQ9UQ07 419 aa12.35□□□□□ -0.43
COL9A2-208ENST00000488463 A0A1W2PRQ8 180 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 CDC42EP2O14613 210 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 ARPC2O15144 300 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 ARHGEF9O43307 516 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 BCL10O95999 233 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 FOSL1P15407 271 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 CDKN1AP38936 164 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 UBE2NP61088 152 aaKnown RBP12.34□□□□□ -0.43
COL9A2-208ENST00000488463 NAAAQ02083 359 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 DGCR6Q14129 220 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 MST1LQ2TV78 715 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 SPATS1Q496A3 300 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF813Q6ZN06 617 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 DNM1P46Q6ZS02 220 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 TMPRSS11FQ6ZWK6 438 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 YTHDF3Q7Z739 585 aaKnown RBP12.34□□□□□ -0.43
COL9A2-208ENST00000488463 MDP1Q86V88 176 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 CCDC36Q8IYA8 594 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 FGFBP3Q8TAT2 258 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF566Q969W8 418 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 FOXB1Q99853 325 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 KATNB1Q9BVA0 655 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 B3GAT2Q9NPZ5 323 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 INIPQ9NRY2 104 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 MAGEL2Q9UJ55 1249 aa12.34□□□□□ -0.43
COL9A2-208ENST00000488463 SAMD4AQ9UPU9 718 aaKnown RBP12.34□□□□□ -0.43
COL9A2-208ENST00000488463 CENPBD1B2RD01 187 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 NDUFS7O75251 213 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 TRMUO75648 421 aaKnown RBP12.33□□□□□ -0.44
COL9A2-208ENST00000488463 DIRAS1O95057 198 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 IGHV4-39P01824 125 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 IGHMP01871 453 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 HLA-HP01893 362 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 B4GALT1P15291 398 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 RHCEP18577 417 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 LIMS1P48059 325 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 RASSF2P50749 326 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 ATP5J2P56134 94 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 HGFACQ04756 655 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 SEC23BQ15437 767 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 ZNF544Q6NX49 715 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 PODNL1Q6PEZ8 512 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 C16orf89Q6UX73 402 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 SKA3Q8IX90 412 aa12.33□□□□□ -0.44
COL9A2-208ENST00000488463 CIARTQ8N365 385 aaPredicted RBP12.33□□□□□ -0.44
COL9A2-208ENST00000488463 HDAC2Q92769 488 aaKnown RBP12.33□□□□□ -0.44
COL9A2-208ENST00000488463 MCHR2Q969V1 340 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms