RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 NOXO1Q8NFA2 376 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 OR4C15Q8NGM1 316 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 OR6N1Q8NGY5 312 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 NMD3Q96D46 503 aaKnown RBP13.91□□□□□ -0.18
UPF3A-208ENST00000484246 FAM46AQ96IP4 442 aaKnown RBP13.91□□□□□ -0.18
UPF3A-208ENST00000484246 ALPK1Q96QP1 1244 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 SMURF2Q9HAU4 748 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 SLC7A8Q9UHI5 535 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 EDARQ9UNE0 448 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 POMPQ9Y244 141 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 SIGLEC7Q9Y286 467 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 RNF115Q9Y4L5 304 aa13.91□□□□□ -0.18
UPF3A-208ENST00000484246 TRAV27A0A087WT01 109 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 TCRBV3S1A0A5B6 114 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 DHRS12A0PJE2 317 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 DPRXA6NFQ7 191 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 MCIDASD6RGH6 385 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 M0R3G1 203 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 PTP4A3O75365 173 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 WNT11O96014 354 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 NR2C1P13056 603 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ACADSP16219 412 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ZNF26P17031 533 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-208ENST00000484246 PTAFRP25105 342 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 IFNGR2P38484 337 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ARF1P84077 181 aaKnown RBP13.9□□□□□ -0.18
UPF3A-208ENST00000484246 RUNX1T1Q06455 604 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 FLOT2Q14254 428 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 NRN1LQ496H8 165 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 HIKESHIQ53FT3 197 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 CARD17Q5XLA6 110 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 KLHL17Q6TDP4 642 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ZNF704Q6ZNC4 412 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ZER1Q7Z7L7 766 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 MEX3DQ86XN8 651 aaKnown RBP13.9□□□□□ -0.18
UPF3A-208ENST00000484246 OR52N5Q8NH56 324 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 OR52J3Q8NH60 311 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 OR51A7Q8NH64 312 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ZNF519Q8TB69 540 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ZNF837Q96EG3 531 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-208ENST00000484246 RSRC1Q96IZ7 334 aaKnown RBP13.9□□□□□ -0.18
UPF3A-208ENST00000484246 TNFRSF13CQ96RJ3 184 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ALG12Q9BV10 488 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 CRNNQ9UBG3 495 aaPredicted RBP13.9□□□□□ -0.18
UPF3A-208ENST00000484246 ST6GALNAC2Q9UJ37 374 aa13.9□□□□□ -0.18
UPF3A-208ENST00000484246 A6NIZ1 184 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 ENTPD5O75356 428 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 TRMUO75648 421 aaKnown RBP13.89□□□□□ -0.19
UPF3A-208ENST00000484246 CD3EP07766 207 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 CD14P08571 375 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 APEHP13798 732 aaKnown RBP13.89□□□□□ -0.19
UPF3A-208ENST00000484246 GSSP48637 474 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 RAP1BP61224 184 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 RPL27P61353 136 aaKnown RBP13.89□□□□□ -0.19
UPF3A-208ENST00000484246 RAP1AP62834 184 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 BSPH1Q075Z2 132 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 C10orf128Q5T292 105 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 OR2T5Q6IEZ7 315 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 C1orf94Q6P1W5 598 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 LRFN4Q6PJG9 635 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 TMEM108Q6UXF1 575 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 C20orf204Q6ZNR8 217 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 FAM122BQ7Z309 247 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 ZNF454Q8N9F8 522 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 PAPD5Q8NDF8 572 aaKnown RBP13.89□□□□□ -0.19
UPF3A-208ENST00000484246 OR2T29Q8NH02 315 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 FNDC8Q8TC99 324 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 MBD6Q96DN6 1003 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 RADILQ96JH8 1075 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 KCNK17Q96T54 332 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 GPA33Q99795 319 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 TMCC3Q9ULS5 477 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 MGAT4BQ9UQ53 548 aa13.89□□□□□ -0.19
UPF3A-208ENST00000484246 DHHO43323 396 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 AHCYL1O43865 530 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 MGRN1O60291 552 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 NDUFB2O95178 105 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 IGLV1-44P01699 117 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 RAF1P04049 648 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 CDH2P19022 906 aaPredicted RBP13.88□□□□□ -0.19
UPF3A-208ENST00000484246 CD40P25942 277 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 FXYD6P3P58550 94 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 CTXN1P60606 82 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 UBE2NP61088 152 aaKnown RBP13.88□□□□□ -0.19
UPF3A-208ENST00000484246 ZNF770Q6IQ21 691 aaPredicted RBP13.88□□□□□ -0.19
UPF3A-208ENST00000484246 PGBD2Q6P3X8 592 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 ARIH2OSQ8N7S6 290 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 CANT1Q8WVQ1 401 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 IGFBPL1Q8WX77 278 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 HDAC2Q92769 488 aaKnown RBP13.88□□□□□ -0.19
UPF3A-208ENST00000484246 TSPAN32Q96QS1 320 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 FOXB1Q99853 325 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 KATNB1Q9BVA0 655 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 CHID1Q9BWS9 393 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 NRIP3Q9NQ35 241 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 AURKCQ9UQB9 309 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 POFUT2Q9Y2G5 429 aa13.88□□□□□ -0.19
UPF3A-208ENST00000484246 ARRDC5A6NEK1 342 aa13.87□□□□□ -0.19
UPF3A-208ENST00000484246 UNC119BA6NIH7 251 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms