RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ARIH2OSQ8N7S6 290 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 NOXO1Q8NFA2 376 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 OR6N1Q8NGY5 312 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 LINC01560Q8TB33 94 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 ZNF519Q8TB69 540 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 WFIKKN1Q96NZ8 548 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 TSPAN32Q96QS1 320 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 MED18Q9BUE0 208 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 OR52D1Q9H346 318 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 GPR35Q9HC97 309 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 PDP1Q9P0J1 537 aaPredicted RBP17.36■□□□□ 0.37
LIME1-205ENST00000480139 ZNF346Q9UL40 294 aaKnown RBP17.36■□□□□ 0.37
LIME1-205ENST00000480139 CDH10Q9Y6N8 788 aa17.36■□□□□ 0.37
LIME1-205ENST00000480139 CIB4A0PJX0 185 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 OR5H1A6NKK0 313 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 M0R3G1 203 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 TRMUO75648 421 aaKnown RBP17.35■□□□□ 0.37
LIME1-205ENST00000480139 GOSR1O95249 250 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 NR2C1P13056 603 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 SLC6A6P31641 620 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 COX10Q12887 443 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 TSC22D1Q15714 1073 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 TIMM23BQ5SRD1 257 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 PHYHD1Q5SRE7 291 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 GPR139Q6DWJ6 353 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 FNDC8Q8TC99 324 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 PYDC1Q8WXC3 89 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 HSD17B8Q92506 261 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 KCNK17Q96T54 332 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 FEVQ99581 238 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 ULBP2Q9BZM5 246 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 CRLF2Q9HC73 371 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 ZNF226Q9NYT6 803 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 IL20Q9NYY1 176 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 GLTPQ9NZD2 209 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 GRHPRQ9UBQ7 328 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 ALPK2Q86TB3 2170 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 PKDREJQ9NTG1 2253 aa17.35■□□□□ 0.37
LIME1-205ENST00000480139 ZNF99A8MXY4 864 aaPredicted RBP17.34■□□□□ 0.37
LIME1-205ENST00000480139 AHCYL1O43865 530 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 RAD51DO75771 328 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 TXNDC12O95881 172 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 SDHAP31040 664 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 RPS6KA3P51812 740 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 ZNF133P52736 654 aaPredicted RBP17.34■□□□□ 0.37
LIME1-205ENST00000480139 CLRN1P58418 232 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 ERVK-25P63136 954 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 RUNX1T1Q06455 604 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 TOP3AQ13472 1001 aaPredicted RBP17.34■□□□□ 0.37
LIME1-205ENST00000480139 DAZAP2Q15038 168 aaPredicted RBP17.34■□□□□ 0.37
LIME1-205ENST00000480139 ANKRD34AQ69YU3 496 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 ZNF627Q7L945 461 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 OR1K1Q8NGR3 316 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 OR5K1Q8NHB7 308 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 DNAJC9Q8WXX5 260 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 LRTOMTQ8WZ04 291 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 GTPBP3Q969Y2 492 aaKnown RBP17.34■□□□□ 0.37
LIME1-205ENST00000480139 C14orf79Q96F83 325 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 ALG12Q9BV10 488 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 SMURF2Q9HAU4 748 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 ADAM18Q9Y3Q7 739 aa17.34■□□□□ 0.37
LIME1-205ENST00000480139 H3BNX3 289 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 IMPA2O14732 288 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 ARPC3O15145 178 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 THBDP07204 575 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 ANXA8P13928 327 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 CRYGSP22914 178 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 ACVR1BP36896 505 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 CEACAM16Q2WEN9 425 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 C9orf135Q5VTT2 229 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 ZNF787Q6DD87 383 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 HIST2H2BCQ6DN03 193 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 ANKRD16Q6P6B7 361 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 LRFN4Q6PJG9 635 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 C22orf34Q6ZV56 151 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 HIPK1Q86Z02 1210 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 MAGEE2Q8TD90 523 aaPredicted RBP17.33■□□□□ 0.36
LIME1-205ENST00000480139 HDAC2Q92769 488 aaKnown RBP17.33■□□□□ 0.36
LIME1-205ENST00000480139 MARVELD3Q96A59 401 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 NMD3Q96D46 503 aaKnown RBP17.33■□□□□ 0.36
LIME1-205ENST00000480139 CENPNQ96H22 339 aaPredicted RBP17.33■□□□□ 0.36
LIME1-205ENST00000480139 ZNF570Q96NI8 536 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 NIPSNAP1Q9BPW8 284 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 UNC79Q9P2D8 2635 aa17.33■□□□□ 0.36
LIME1-205ENST00000480139 FLNBO75369 2602 aaKnown RBP17.32■□□□□ 0.36
LIME1-205ENST00000480139 IDH3BO43837 385 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 ENTPD5O75356 428 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 HOXB1P14653 301 aaPredicted RBP17.32■□□□□ 0.36
LIME1-205ENST00000480139 TAB1Q15750 504 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 MESTQ5EB52 335 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 C10orf128Q5T292 105 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 ADCK1Q86TW2 530 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 HS3ST5Q8IZT8 346 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 SVOPLQ8N434 492 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 OR52L1Q8NGH7 329 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 ZNF837Q96EG3 531 aaPredicted RBP17.32■□□□□ 0.36
LIME1-205ENST00000480139 SAMD8Q96LT4 415 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 Q96M85 177 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 EGLN3Q9H6Z9 239 aa17.32■□□□□ 0.36
LIME1-205ENST00000480139 ZNF556Q9HAH1 456 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms