RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	MAPK9	P45984	424 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDKN1B	P46527	198 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC6A9	P48067	706 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	NPBWR1	P48145	328 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	GATM	P50440	423 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	PNLIPRP2	P54317	469 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	GAS1	P54826	345 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CASP6	P55212	293 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDH11	P55287	796 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TAS2R19	P59542	299 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR2B8P	P59922	312 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OSTN	P61366	133 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MRPS21	P82921	87 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.29	□□□□□ -1.72	5e-7	■■■■□ 26.5
PTCD3-212	ENST00000477520	TLE4	Q04727	773 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	AIMP2	Q13155	320 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	KIAA0141	Q14154	515 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	JOSD1	Q15040	202 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR8G1	Q15617	311 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MOGAT2	Q3SYC2	334 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	NKAIN1	Q4KMZ8	207 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MEST	Q5EB52	335 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	XKR4	Q5GH76	650 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM240	Q5SV17	173 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	LYPLAL1	Q5VWZ2	237 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3G	Q6DHY5	549 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR52W1	Q6IF63	320 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MRM1	Q6IN84	353 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM71	Q6P5X7	295 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	BTNL3	Q6UXE8	466 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MBOAT1	Q6ZNC8	495 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520		Q6ZPB1	254 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OTOP2	Q7RTS6	562 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TECPR1	Q7Z6L1	1165 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	RABEPK	Q7Z6M1	372 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	PXK	Q7Z7A4	578 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	VRK2	Q86Y07	508 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TRAPPC5	Q8IUR0	188 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	BAP18	Q8IXM2	172 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	BEST3	Q8N1M1	668 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ACBD4	Q8NC06	268 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MDGA1	Q8NFP4	955 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SEMA6D	Q8NFY4	1073 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR13C8	Q8NGS7	320 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	HUS1B	Q8NHY5	278 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC2A12	Q8TD20	617 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CXorf40A	Q8TE69	158 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	PAQR8	Q8TEZ7	354 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SNX33	Q8WV41	574 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	NUDCD2	Q8WVJ2	157 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TNFAIP8L1	Q8WVP5	186 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	C22orf15	Q8WYQ4	148 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	FGF11	Q92914	225 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TAAR8	Q969N4	342 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ANAPC16	Q96DE5	110 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	BSCL2	Q96G97	398 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	FAHD2A	Q96GK7	314 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	PPP1R16A	Q96I34	528 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	PIWIL1	Q96J94	861 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SMIM8	Q96KF7	97 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MRGPRX4	Q96LA9	322 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SAMD8	Q96LT4	415 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CAMK1G	Q96NX5	476 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MYOC	Q99972	504 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ACBD6	Q9BR61	282 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	PCGF1	Q9BSM1	259 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF471	Q9BX82	626 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR10A4	Q9H209	315 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLCO5A1	Q9H2Y9	848 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	RGCC	Q9H4X1	137 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	RHOF	Q9HBH0	211 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	NT5M	Q9NPB1	228 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CHST11	Q9NPF2	352 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SIRT7	Q9NRC8	400 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	RLIM	Q9NVW2	624 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ELOVL2	Q9NXB9	296 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	DNAJC27	Q9NZQ0	273 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	LRFN1	Q9P244	771 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	KCNE5	Q9UJ90	142 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC25A13	Q9UJS0	675 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	RASD1	Q9Y272	281 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	FAM96B	Q9Y3D0	163 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	INSL6	Q9Y581	213 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TDRD15	B5MCY1	1934 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TSC2	P49815	1807 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	LTBP2	Q14767	1821 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520		A0A1B0GW64	132 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	GXYLT2	A0PJZ3	443 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	C1orf226	A1L170	272 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	SMCO3	A2RU48	225 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR5H15	A6NDH6	313 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	TVP23A	A6NH52	213 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	ARL5C	A6NH57	179 aa		4.28	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR5H14	A6NHG9	310 aa		4.28	□□□□□ -1.72

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