RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 GIPC3Q8TF64 312 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 ASB10Q8WXI3 467 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 GTPBP3Q969Y2 492 aaKnown RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 APH1AQ96BI3 265 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 NRBF2Q96F24 287 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 CENPNQ96H22 339 aaPredicted RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 C18orf12Q96KH6 178 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 SAMD8Q96LT4 415 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 TSPAN32Q96QS1 320 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 GPX7Q96SL4 187 aaPredicted RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 TACO1Q9BSH4 297 aaKnown RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 KATNB1Q9BVA0 655 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 RBM24Q9BX46 236 aaKnown RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 SEMA6AQ9H2E6 1030 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 NELFAQ9H3P2 528 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 EGLN3Q9H6Z9 239 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 KCNJ16Q9NPI9 418 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 INIPQ9NRY2 104 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 IL20Q9NYY1 176 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 PDP1Q9P0J1 537 aaPredicted RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 C6orf203Q9P0P8 240 aaPredicted RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 MALT1Q9UDY8 824 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 TMEFF2Q9UIK5 374 aaPredicted RBP6.15□□□□□ -1.42
LIMD1-204ENST00000474665 TMCC3Q9ULS5 477 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 PROCRQ9UNN8 238 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 RCE1Q9Y256 329 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 NOX1Q9Y5S8 564 aa6.15□□□□□ -1.42
LIMD1-204ENST00000474665 FLNAP21333 2647 aaKnown RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 NPIPB13A6NJU9 1138 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 SAC3D1A6NKF1 404 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 NPIPB4C9JG80 1138 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 BHLHE40O14503 412 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 OR6A2O95222 327 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 LY6G6DO95868 133 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 TXNDC12O95881 172 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ADAP00813 363 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 HIST1H2ABP04908 130 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 THBDP07204 575 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 CD14P08571 375 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 INHBBP09529 407 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 PGA4P0DJD7 388 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 PGA3P0DJD8 388 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 UGT2B10P36537 528 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 CD79BP40259 229 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 PCYT1AP49585 367 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 CTXN1P60606 82 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ELF3P78545 371 aaPredicted RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 CAMK2DQ13557 499 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 C1DQ13901 141 aaKnown RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 GK3PQ14409 553 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 MELKQ14680 651 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 HIST3H3Q16695 136 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 RFX4Q33E94 735 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ANKDD1AQ495B1 522 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 MESTQ5EB52 335 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 CARD17Q5XLA6 110 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ZFP1Q6P2D0 407 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 NIPAL3Q6P499 406 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 SMARCD3Q6STE5 483 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 RASSF6Q6ZTQ3 369 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 PTCHD4Q6ZW05 846 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 HIST3H2AQ7L7L0 130 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 RRM2BQ7LG56 351 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 CXorf67Q86X51 503 aaPredicted RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF100Q8IYN0 542 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF433Q8N7K0 673 aaPredicted RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 OR4Q3Q8NH05 313 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 OR5K1Q8NHB7 308 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 GNPDA2Q8TDQ7 276 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 HDAC2Q92769 488 aaKnown RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 NINJ1Q92982 152 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 HIST1H2ACQ93077 130 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 RNASE6Q93091 150 aaKnown RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 TMEM54Q969K7 222 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 Q96M85 177 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ALKBH3Q96Q83 286 aaPredicted RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 KCNK17Q96T54 332 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 DDOQ99489 341 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 SLC29A1Q99808 456 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 LINC00470Q9BZP3 86 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 GABARAPL1Q9H0R8 117 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 SLCO5A1Q9H2Y9 848 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 OR52D1Q9H346 318 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 TXNIPQ9H3M7 391 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 LIME1Q9H400 295 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 YY1AP1Q9H869 796 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 SMURF2Q9HAU4 748 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 NRIP3Q9NQ35 241 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 PARPBPQ9NWS1 579 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF346Q9UL40 294 aaKnown RBP6.14□□□□□ -1.43
LIMD1-204ENST00000474665 OAZ3Q9UMX2 235 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 MGAT4BQ9UQ53 548 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 CDH10Q9Y6N8 788 aa6.14□□□□□ -1.43
LIMD1-204ENST00000474665 ARFGEF3Q5TH69 2177 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 ZNF503-AS2A6NEH8 195 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 E9PQ18 207 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 RPL36A-HNRNPH2H7BZ11 118 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 H7C1C5 153 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 DCTN6O00399 190 aa6.13□□□□□ -1.43
LIMD1-204ENST00000474665 GNGT2O14610 69 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms