RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SPICQ8N5J4 248 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 CPEB3Q8NE35 698 aaKnown RBP5.81□□□□□ -1.48
HDAC1-204ENST00000471488 OR10S1Q8NGN2 331 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 COQ8BQ96D53 544 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 NEURL3Q96EH8 262 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 TXNDC15Q96J42 360 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 LRMDAQ9H2I8 198 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 SLC6A13Q9NSD5 602 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 DCAF16Q9NXF7 216 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 MMP24Q9Y5R2 645 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 INSIG2Q9Y5U4 225 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 NPTNQ9Y639 398 aa5.81□□□□□ -1.48
HDAC1-204ENST00000471488 NUP214P35658 2090 aaPredicted RBP5.81□□□□□ -1.48
HDAC1-204ENST00000471488 IQCMA0A1B0GVH7 501 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 C11orf98E9PRG8 122 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 COPEO14579 308 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 TRAF3IP2O43734 574 aaPredicted RBP5.8□□□□□ -1.48
HDAC1-204ENST00000471488 PLIN3O60664 434 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF205O95201 554 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 FARS2O95363 451 aaKnown RBP5.8□□□□□ -1.48
HDAC1-204ENST00000471488 C1QCP02747 245 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 SERPINA5P05154 406 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 MYZAPP0CAP1 466 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 HLA-DOBP13765 273 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF12P17014 697 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 GCAP28676 217 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 APLNRP35414 380 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 CCT5P48643 541 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 CSNK1A1P48729 337 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 ANXA11P50995 505 aaKnown RBP5.8□□□□□ -1.48
HDAC1-204ENST00000471488 DNAJB13P59910 316 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 TNFAIP6P98066 277 aaPredicted RBP5.8□□□□□ -1.48
HDAC1-204ENST00000471488 HSF2Q03933 536 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 PDCD1Q15116 288 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 CCDC153Q494R4 210 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 LIN52Q52LA3 116 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 RUNDC3AQ59EK9 446 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 C6orf136Q5SQH8 315 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 VAX1Q5SQQ9 334 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 CEP85LQ5SZL2 805 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 THEM4Q5T1C6 240 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 RUSC1-AS1Q66K80 236 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 C6orf89Q6UWU4 347 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 H1FNTQ75WM6 255 aaPredicted RBP5.8□□□□□ -1.48
HDAC1-204ENST00000471488 SERPINA11Q86U17 422 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF584Q8IVC4 421 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 SKA3Q8IX90 412 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 C20orf196Q8IYI0 205 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 C1orf174Q8IYL3 243 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 LRRC18Q8N456 261 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 C11orf44Q8N8P7 122 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 SCAIQ8N9R8 606 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 HIPK4Q8NE63 616 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 ANKK1Q8NFD2 765 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 OR52P1PQ8NH57 321 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 MFSD8Q8NHS3 518 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 FGFBP3Q8TAT2 258 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF519Q8TB69 540 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 ACMSDQ8TDX5 336 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 C3orf30Q96M34 536 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 PCGF1Q9BSM1 259 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 ASPNQ9BXN1 380 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 TSPYL1Q9H0U9 437 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 SLC38A1Q9H2H9 487 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 MTHFD2LQ9H903 347 aaPredicted RBP5.8□□□□□ -1.48
HDAC1-204ENST00000471488 MSL2Q9HCI7 577 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 NKIRAS2Q9NYR9 191 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 PSMC3IPQ9P2W1 217 aaPredicted RBP5.8□□□□□ -1.48
HDAC1-204ENST00000471488 KLHL21Q9UJP4 597 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 FBXL3Q9UKT7 428 aa5.8□□□□□ -1.48
HDAC1-204ENST00000471488 DSPPQ9NZW4 1301 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 A0A096LPI6 279 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 SRRM5B3KS81 715 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 HMGN4O00479 90 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 TIMM8AO60220 97 aaPredicted RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 UBOX5O94941 541 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 BCHEP06276 602 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF250P15622 560 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 RPS2P15880 293 aaKnown RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 CD80P33681 288 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 MPV17P39210 176 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ACAA2P42765 397 aaKnown RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 UCP2P55851 309 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 BIDP55957 195 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 LOXL3P58215 753 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 LARS2Q15031 903 aaKnown RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 BEAN1Q3B7T3 259 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF718Q3SXZ3 478 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 SPRNQ5BIV9 151 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 RPS26P11Q5JNZ5 115 aaPredicted RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 GPR157Q5UAW9 335 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF620Q6ZNG0 422 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 ZNF621Q6ZSS3 439 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 VASH1Q7L8A9 365 aaPredicted RBP5.79□□□□□ -1.48
HDAC1-204ENST00000471488 SLC16A14Q7RTX9 510 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 LRRC34Q8IZ02 419 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 TMEM123Q8N131 208 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 C4orf33Q8N1A6 199 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 SLC22A24Q8N4F4 322 aa5.79□□□□□ -1.48
HDAC1-204ENST00000471488 OR4K5Q8NGD3 323 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms