RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 PLEKHF2Q9H8W4 249 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 MSL2Q9HCI7 577 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF281Q9Y2X9 895 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 PIAS3Q9Y6X2 628 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 ENPP4Q9Y6X5 453 aa6.4□□□□□ -1.39
BRCA1-210ENST00000471181 A0A1B0GTQ1 180 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CDHR4A6H8M9 788 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF814B7Z6K7 855 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 RRP8O43159 456 aaKnown RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 FZD7O75084 574 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 FGF3P11487 239 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 PXNP49023 591 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 TPPP2P59282 170 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CDKN3Q16667 212 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 WBP2NLQ6ICG8 309 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ZDHHC24Q6UX98 284 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 COMMD6Q7Z4G1 85 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 VRK2Q86Y07 508 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 FIBINQ8TAL6 211 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ZFAND2BQ8WV99 257 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 RASD2Q96D21 266 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 VAMP8Q9BV40 100 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 C1QTNF2Q9BXJ5 285 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 SLC17A9Q9BYT1 436 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 NKX6-2Q9C056 277 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 NKX2-4Q9H2Z4 354 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 OR52A1Q9UKL2 312 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 TRAV34A0A0B4J273 112 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF320A2RRD8 509 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 NUDT19A8MXV4 375 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 UMAD1C9J7I0 102 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CNMDO75829 334 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 GJB5O95377 273 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 H2AFB1P0C5Y9 115 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 IAPPP10997 89 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 MYF6P23409 242 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ETV1P50549 477 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 RPE65Q16518 533 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 Q3ZCU0 254 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ENTPD8Q5MY95 495 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 PLAG1Q6DJT9 500 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 RHOUQ7L0Q8 258 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 OR1J1Q8NGS3 322 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CD200R1Q8TD46 325 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 FAM3CQ92520 227 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 UTP4Q969X6 686 aaKnown RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 KIRREL1Q96J84 757 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 SLC6A18Q96N87 628 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CHST6Q9GZX3 395 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 BET1LQ9NYM9 111 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 IL37Q9NZH6 218 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ASH2LQ9UBL3 628 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 MMACHCQ9Y4U1 282 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 SLC22A7Q9Y694 548 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ACOD1A6NK06 481 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 PRSS44E7EML9 344 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF587BE7ETH6 402 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 GABRPO00591 440 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 SDHDO14521 159 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CCSO14618 274 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CALCBP10092 127 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ACP2P11117 423 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 FABP4P15090 132 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 P2RY2P41231 377 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 GPR12P47775 334 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 WNT7BP56706 349 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 TXNRD3NBQ6F5E7 133 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 LINC00346Q8IVM7 164 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 RELL2Q8NC24 303 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 TANKQ92844 425 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 KLRG1Q96E93 195 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 MED17Q9NVC6 651 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 SALL4Q9UJQ4 1053 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 FBXL4Q9UKA2 621 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 COL16A1Q07092 1604 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 A0A0B4J203 849 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 GALR2O43603 387 aaPredicted RBP6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CSF3P09919 207 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 OR8G3PP0DMU2 310 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 RAB5AP20339 215 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 TRIM23P36406 574 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 PGGT1BP53609 377 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 JAG1P78504 1218 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 GALNT2Q10471 571 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 PDZK1IP1Q13113 114 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 IRF4Q15306 451 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 OR1Q1Q15612 314 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 OR4D1Q15615 310 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ETFDHQ16134 617 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 BCL7AQ4VC05 210 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF385BQ569K4 471 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 SPANXN5Q5MJ07 72 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 PSAPL1Q6NUJ1 521 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 FAM122BQ7Z309 247 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 CDC20BQ86Y33 519 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 OR4F15Q8NGB8 312 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 OR5AR1Q8NGP9 310 aa6.39□□□□□ -1.39
BRCA1-210ENST00000471181 MARC2Q969Z3 335 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms