RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 NDUFB11Q9NX14 153 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 IL20Q9NYY1 176 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 LOXL2Q9Y4K0 774 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 A0A1B0GVG6 124 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 ARPC1BO15143 372 aaKnown RBP12.6□□□□□ -0.39
BRAT1-203ENST00000467558 HTR2CP28335 458 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 GCH1P30793 250 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 LSSP48449 732 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 CXADRP78310 365 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 STEAP3Q658P3 488 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 PAQR6Q6TCH4 344 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 SYS1Q8N2H4 156 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 SIRT6Q8N6T7 355 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 LRRC20Q8TCA0 184 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 PDCD1LG2Q9BQ51 273 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 ARRDC1-AS1Q9H2J1 176 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 OR51J1Q9H342 316 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 SIRT3Q9NTG7 399 aaPredicted RBP12.6□□□□□ -0.39
BRAT1-203ENST00000467558 UGT2A1Q9Y4X1 527 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 SC5DO75845 299 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 IL9P15248 144 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 CPEP16870 476 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 CD53P19397 219 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 NR4A2P43354 598 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 TAS2R19P59542 299 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 RTL6Q6ICC9 239 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 ESPNLQ6ZVH7 1005 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 DCXRQ7Z4W1 244 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 LACC1Q8IV20 430 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 GJC3Q8NFK1 279 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 OR11A1Q9GZK7 315 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 TMEM165Q9HC07 324 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 APMAPQ9HDC9 416 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 ZNF346Q9UL40 294 aaKnown RBP12.6□□□□□ -0.39
BRAT1-203ENST00000467558 RCE1Q9Y256 329 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 MRPS2Q9Y399 296 aaKnown RBP12.6□□□□□ -0.39
BRAT1-203ENST00000467558 RHBDD3Q9Y3P4 386 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 OR2J2O76002 312 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 SOD1P00441 154 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 CDK10Q15131 360 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 STK11Q15831 433 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 MKXQ8IYA7 352 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 GALNT11Q8NCW6 608 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 SLC25A46Q96AG3 418 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 PHB2Q99623 299 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 NUDT9Q9BW91 350 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 FAM60AQ9NP50 221 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 FGF20Q9NP95 211 aaPredicted RBP12.6□□□□□ -0.39
BRAT1-203ENST00000467558 KCNS2Q9ULS6 477 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 B3GALT5Q9Y2C3 310 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 UBE2J1Q9Y385 318 aaPredicted RBP12.6□□□□□ -0.39
BRAT1-203ENST00000467558 SPEF1Q9Y4P9 236 aa12.6□□□□□ -0.39
BRAT1-203ENST00000467558 SPAG17Q6Q759 2223 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 SLC22A5O76082 557 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 SRMP19623 302 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 MAP2K6P52564 334 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 BDH1Q02338 343 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 PRICKLE4Q2TBC4 344 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 COX15Q7KZN9 410 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 GLB1L2Q8IW92 636 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 ZNF611Q8N823 705 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 RBFOX1Q9NWB1 397 aaKnown RBP12.59□□□□□ -0.39
BRAT1-203ENST00000467558 CTSFQ9UBX1 484 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 RLFQ13129 1914 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 GPX5O75715 221 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 CYCSP99999 105 aaKnown RBP12.59□□□□□ -0.39
BRAT1-203ENST00000467558 MPEG1Q2M385 716 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 SLC36A2Q495M3 483 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 C9orf135Q5VTT2 229 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 MRM1Q6IN84 353 aaKnown RBP12.59□□□□□ -0.39
BRAT1-203ENST00000467558 OR4C3Q8NH37 302 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 MRGPRX4Q96LA9 322 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 ZPBPQ9BS86 351 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 EMC6Q9BV81 110 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 ST6GALNAC5Q9BVH7 336 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 OR52A1Q9UKL2 312 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 A0A1W2PPV9 198 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 ZC3H12DA2A288 527 aaKnown RBP12.59□□□□□ -0.39
BRAT1-203ENST00000467558 MEIS3P1A6NDR6 274 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 HMX3A6NHT5 357 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 EEF1E1-BLOC1S5C9J1V9 151 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 I3L521 148 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 ITGB2P05107 769 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 SUMO3P55854 103 aaPredicted RBP12.59□□□□□ -0.39
BRAT1-203ENST00000467558 TAS2R31P59538 309 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 TRA2AQ13595 282 aaKnown RBP eCLIP12.59□□□□□ -0.39
BRAT1-203ENST00000467558 TPBGQ13641 420 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 TATDN3Q17R31 274 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 GUSBP11Q6P575 273 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 OR1L3Q8NH93 324 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 NRTNQ99748 197 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 DNTTIP1Q9H147 329 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 ETV7Q9Y603 341 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 PRSS23O95084 383 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 EPHA8P29322 1005 aaPredicted RBP12.59□□□□□ -0.39
BRAT1-203ENST00000467558 CEBPGP53567 150 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 AIMP2Q13155 320 aaKnown RBP12.59□□□□□ -0.39
BRAT1-203ENST00000467558 GPR176Q14439 515 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 TMPRSS11FQ6ZWK6 438 aa12.59□□□□□ -0.39
BRAT1-203ENST00000467558 PIGCQ92535 297 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms