RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 TBC1D3HP0C7X1 549 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 MST1P26927 711 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 PRMT2P55345 433 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 SEC13P55735 322 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 GMFBP60983 142 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 ZNHIT3Q15649 155 aaPredicted RBP16.76■□□□□ 0.27
HPS3-204ENST00000462030 ZNF141Q15928 474 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 ISXQ2M1V0 245 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TANGO2Q6ICL3 276 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TBC1D3CQ6IPX1 549 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 ZNF595Q8IYB9 648 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TBC1D3Q8IZP1 549 aaPredicted RBP16.76■□□□□ 0.27
HPS3-204ENST00000462030 ZNF676Q8N7Q3 588 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 PBX4Q9BYU1 374 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 EXO5Q9H790 373 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 IFT46Q9NQC8 304 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 FANCMQ8IYD8 2048 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TRBV5-7A0A0A0MS05 114 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TRAV14DV4A0A0A6YYC5 116 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 NPIPB9F8W1W9 429 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 PLRG1O43660 514 aaKnown RBP16.76■□□□□ 0.27
HPS3-204ENST00000462030 AKAIN1P0CW23 69 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 RPA2P15927 270 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 PRPS1P60891 318 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 RUNX3Q13761 415 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 GPR18Q14330 331 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 HYAL4Q2M3T9 481 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 FAM74A1Q5RGS3 127 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 FAM122BQ7Z309 247 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 CDC20BQ86Y33 519 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 OR2G2Q8NGZ5 317 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 OR4C3Q8NH37 302 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 MOGAT1Q96PD6 335 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 GPX7Q96SL4 187 aaPredicted RBP16.76■□□□□ 0.27
HPS3-204ENST00000462030 SLC38A3Q99624 504 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 TAS2R8Q9NYW2 309 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 COL4A2P08572 1712 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 ALPK2Q86TB3 2170 aa16.76■□□□□ 0.27
HPS3-204ENST00000462030 HCRTR1O43613 425 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 ZNF254O75437 659 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 F13BP05160 661 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 SLC35E2P0CK97 266 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 ACHEP22303 614 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 CSF2RBP32927 897 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 POU3F4P49335 361 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 RNF44Q7L0R7 432 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 PRSS35Q8N3Z0 413 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 C10orf53Q8N6V4 93 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 MARC2Q969Z3 335 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 VSTM2LQ96N03 204 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 ZNF230Q9UIE0 474 aaPredicted RBP16.75■□□□□ 0.27
HPS3-204ENST00000462030 GPANK1O95872 356 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 CTSBP07858 339 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 CTXN1P60606 82 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 DMWDQ09019 674 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 OTPQ5XKR4 325 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 ZNF776Q68DI1 518 aaPredicted RBP16.75■□□□□ 0.27
HPS3-204ENST00000462030 KRT77Q7Z794 578 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 GATSQ8NAP1 163 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 OR6N2Q8NGY6 317 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 ZNF417Q8TAU3 575 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 LAMP5Q9UJQ1 280 aa16.75■□□□□ 0.27
HPS3-204ENST00000462030 TGFBR3LH3BV60 316 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 DNASE2O00115 360 aaPredicted RBP16.74■□□□□ 0.27
HPS3-204ENST00000462030 CDC123O75794 336 aaPredicted RBP16.74■□□□□ 0.27
HPS3-204ENST00000462030 AKR7A3O95154 331 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 PLATP00750 562 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 ITGA5P08648 1049 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 FCARP24071 287 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 SLC25A1P53007 311 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 ENPP2Q13822 863 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 MPPED2Q15777 294 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.74■□□□□ 0.27
HPS3-204ENST00000462030 CSNK1A1LQ8N752 337 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 PXT1Q8NFP0 134 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 PATE1Q8WXA2 126 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 POFUT1Q9H488 388 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 WDR76Q9H967 626 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 RFPL4AA6NLU0 287 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 EFCAB7A8K855 629 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 RFPL4AL1F8VTS6 287 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 H3BUI4 141 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 SMAD9O15198 467 aaKnown RBP16.74■□□□□ 0.27
HPS3-204ENST00000462030 PRAMEF2O60811 474 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 TPPPO94811 219 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 CD14P08571 375 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 LY6G6FQ5SQ64 297 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 LRRC69Q6ZNQ3 347 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 DPY19L4Q7Z388 723 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 LRRC75AQ8NAA5 344 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 ST8SIA2Q92186 375 aa16.74■□□□□ 0.27
HPS3-204ENST00000462030 RBM18Q96H35 190 aaKnown RBP16.74■□□□□ 0.27
HPS3-204ENST00000462030 CHD9Q3L8U1 2897 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 SERINC4A6NH21 518 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 PRKNO60260 465 aaPredicted RBP16.73■□□□□ 0.27
HPS3-204ENST00000462030 GRK6P43250 576 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 ARHGDIBP52566 201 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 RAB38P57729 211 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 ALG10Q5BKT4 473 aa16.73■□□□□ 0.27
HPS3-204ENST00000462030 STEAP1BQ6NZ63 245 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms