RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 RIN1Q13671 783 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 SLC25A35Q3KQZ1 300 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 C3orf33Q6P1S2 294 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 PAPD4Q6PIY7 484 aaKnown RBP12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 ZNF836Q6ZNA1 936 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 FAM122BQ7Z309 247 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 SGPP2Q8IWX5 399 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 C10orf111Q8N326 155 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 FAM26EQ8N5C1 309 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 ALG14Q96F25 216 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 C1QTNF3Q9BXJ4 246 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 PLEKHJ1Q9NW61 149 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 NDUFB11Q9NX14 153 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 SAGE1Q9NXZ1 904 aa12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 ING1Q9UK53 422 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-216ENST00000457953 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 PRSS38A1L453 326 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 HBQ1P09105 142 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 SLC2A1P11166 492 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 SNRPGP62308 76 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 UBE2IP63279 158 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 GGTA1PQ4G0N0 100 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 PRAMEF8Q5VWM4 474 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 PRAMEF7Q5VXH5 474 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 FAM71E1Q6IPT2 247 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 WDR87Q6ZQQ6 2873 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 ZNF765Q7L2R6 523 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 BORCS8Q96FH0 119 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 ACSS1Q9NUB1 689 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 EHFQ9NZC4 300 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 NOTCH3Q9UM47 2321 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 RNF215Q9Y6U7 377 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 TDRD6O60522 2096 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 TMPRSS11DO60235 418 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 SRMP19623 302 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 PGCP20142 388 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 AFF3P51826 1226 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 ZBTB37Q5TC79 503 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 LINC00346Q8IVM7 164 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 OR10Z1Q8NGY1 313 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 SPACA5Q96QH8 159 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 SDHCQ99643 169 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 TMEM38AQ9H6F2 299 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 MEPEQ9NQ76 525 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 SRPX2O60687 465 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 SLCO2B1O94956 709 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 LGI1O95970 557 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 OPRD1P41143 372 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 MAGEB1P43366 347 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 NDUFA6P56556 154 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 MRPS10P82664 201 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 LIPNQ5VXI9 398 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 FAHD1Q6P587 224 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 NANPQ8TBE9 248 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 FAM213BQ8TBF2 198 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 TMEM234Q8WY98 164 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 PRRT1Q99946 306 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 TSPAN10Q9H1Z9 355 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 SLC6A14Q9UN76 642 aa12.43□□□□□ -0.42
KCNMA1-216ENST00000457953 AGAP14A8MT82 685 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 PEX12O00623 359 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 RFX2P48378 723 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 MECP2P51608 486 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 LIM2P55344 173 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 PRPS1P60891 318 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 MAT1AQ00266 395 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 GLO1Q04760 184 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 CLINT1Q14677 625 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 MEP1BQ16820 701 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 AVPI1Q5T686 147 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 HIST2H3PS2Q5TEC6 136 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 LILRA6Q6PI73 481 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 TRAPPC6BQ86SZ2 158 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 LRRTM1Q86UE6 522 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 TMEM200AQ86VY9 491 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 SLC35F3Q8IY50 421 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 SUMF2Q8NBJ7 301 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 HOXB13Q92826 284 aaPredicted RBP12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 PLA2G12AQ9BZM1 189 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 SPHK1Q9NYA1 384 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 KLF15Q9UIH9 416 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 DOCK4Q8N1I0 1966 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 TMEM129A0AVI4 362 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 STK17BO94768 372 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 RAB3AP20336 220 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 SERPINA2P20848 420 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 NPY4RP50391 375 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 HNRNPKP61978 463 aaKnown RBP eCLIP12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 SSX1Q16384 188 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 TEX261Q6UWH6 196 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 MBOAT2Q6ZWT7 520 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 MARC2Q969Z3 335 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 WDR89Q96FK6 387 aaPredicted RBP12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 MS4A8Q9BY19 250 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 DNTTIP1Q9H147 329 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 ICKQ9UPZ9 632 aa12.42□□□□□ -0.42
KCNMA1-216ENST00000457953 U3KQ87 197 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms