RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 HIPK1Q86Z02 1210 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 LRRC17Q8N6Y2 441 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 ZNF566Q969W8 418 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 DENND2DQ9H6A0 471 aaPredicted RBP11.16□□□□□ -0.62
CHD3-206ENST00000452447 NOX3Q9HBY0 568 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 MYOZ1Q9NP98 299 aaPredicted RBP11.16□□□□□ -0.62
CHD3-206ENST00000452447 GID8Q9NWU2 228 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 GLTPQ9NZD2 209 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 SPEF1Q9Y4P9 236 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 LOC390937A0A1W2PQ73 354 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 SH3PXD2BA1X283 911 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 BLOC1S5-TXNDC5H3BN57 136 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 hCG_2039718K7EN88 272 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 FXYD1O00168 92 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 ENTPD5O75356 428 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 UBL3O95164 117 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 LYPD3O95274 346 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 RAB36O95755 333 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 GIPRP48546 466 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 PTDSS1P48651 473 aaKnown RBP11.16□□□□□ -0.62
CHD3-206ENST00000452447 CRYBA2P53672 197 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 RAB1AP62820 205 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 LSM11P83369 360 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHD3-206ENST00000452447 GGTLC2Q14390 218 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 CHRFAM7AQ494W8 412 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 C6orf52Q5T4I8 152 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 CYB5R2Q6BCY4 276 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 KRT80Q6KB66 452 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 DEF8Q6ZN54 512 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 PIWIL3Q7Z3Z3 882 aaKnown RBP11.16□□□□□ -0.62
CHD3-206ENST00000452447 NANOGNBQ7Z5D8 188 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 WDFY1Q8IWB7 410 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 SVOPLQ8N434 492 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 ZNF540Q8NDQ6 660 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 SLC25A44Q96H78 314 aaPredicted RBP11.16□□□□□ -0.62
CHD3-206ENST00000452447 KCNK17Q96T54 332 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 ZNF426Q9BUY5 554 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 DYNLRB1Q9NP97 96 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 CMAHPQ9Y471 501 aa11.16□□□□□ -0.62
CHD3-206ENST00000452447 MXRA5Q9NR99 2828 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 BCL10O95999 233 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 IFNA2P01563 188 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 MT-ND1P03886 318 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 ASAH2BP0C7U1 165 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 LSP1P33241 339 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 GALK2Q01415 458 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 MELKQ14680 651 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 IQCCQ4KMZ1 466 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 C10orf82Q8WW14 230 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 TMEM54Q969K7 222 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 MS4A3Q96HJ5 214 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 ZNF583Q96ND8 569 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 FOXN4Q96NZ1 517 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 DOK1Q99704 481 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 PRSS27Q9BQR3 290 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 POLR2J2Q9GZM3 115 aaKnown RBP11.15□□□□□ -0.62
CHD3-206ENST00000452447 POLR2J3Q9H1A7 115 aaKnown RBP11.15□□□□□ -0.62
CHD3-206ENST00000452447 MEPEQ9NQ76 525 aaPredicted RBP11.15□□□□□ -0.62
CHD3-206ENST00000452447 FBXL3Q9UKT7 428 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 CAPN7Q9Y6W3 813 aa11.15□□□□□ -0.62
CHD3-206ENST00000452447 A0A1W2PRG6 482 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 MCIDASD6RGH6 385 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 SHOX2O60902 331 aaPredicted RBP11.14□□□□□ -0.63
CHD3-206ENST00000452447 OR5F1O95221 314 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
CHD3-206ENST00000452447 IGHG1P01857 330 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 ZNF14P17017 642 aaPredicted RBP11.14□□□□□ -0.63
CHD3-206ENST00000452447 FUT1P19526 365 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 TNFRSF1BP20333 461 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 NR4A1P22736 598 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 RBM34P42696 430 aaKnown RBP11.14□□□□□ -0.63
CHD3-206ENST00000452447 NR4A2P43354 598 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 OR1E2P47887 323 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 PIN1Q13526 163 aaPredicted RBP11.14□□□□□ -0.63
CHD3-206ENST00000452447 LRRC23Q53EV4 343 aaPredicted RBP11.14□□□□□ -0.63
CHD3-206ENST00000452447 GKAP1Q5VSY0 366 aaPredicted RBP11.14□□□□□ -0.63
CHD3-206ENST00000452447 CGB2Q6NT52 195 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 NKAIN4Q8IVV8 208 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 OR2T12Q8NG77 320 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 NEU4Q8WWR8 484 aaPredicted RBP11.14□□□□□ -0.63
CHD3-206ENST00000452447 TPD52L3Q96J77 140 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 MDFIQ99750 246 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 FAM53CQ9NYF3 392 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 RIMS3Q9UJD0 308 aa11.14□□□□□ -0.63
CHD3-206ENST00000452447 FAM220BPB1ANY3 271 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 DHHO43323 396 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 F13BP05160 661 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 QDPRP09417 244 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 OR8G3PP0DMU2 310 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 ZNF35P13682 527 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 IFNA8P32881 189 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 KDELR2P33947 212 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 GZMKP49863 264 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 CLRN1P58418 232 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 GUCY1A3Q02108 690 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 RPL18Q07020 188 aaKnown RBP11.13□□□□□ -0.63
CHD3-206ENST00000452447 CYBRD1Q53TN4 286 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 PODNL1Q6PEZ8 512 aa11.13□□□□□ -0.63
CHD3-206ENST00000452447 LRFN4Q6PJG9 635 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms