RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ANKRD33Q7Z3H0 272 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 SZRD1Q7Z422 152 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 OR8S1Q8NH09 359 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 KLK6Q92876 244 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 RAB24Q969Q5 203 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 CDCA3Q99618 268 aaPredicted RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 ACTRT3Q9BYD9 372 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 FBXO44Q9H4M3 255 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 SYNPO2LQ9H987 977 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 DMRT3Q9NQL9 472 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 VSX1Q9NZR4 365 aaPredicted RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 RBPJLQ9UBG7 517 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 FBXO4Q9UKT5 387 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 WIF1Q9Y5W5 379 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 ETV7Q9Y603 341 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 TRBV2A0A0J9YWF9 115 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 FOXE1O00358 373 aaPredicted RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 CDC42EP2O14613 210 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 ZNF197O14709 1029 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 PIN1P1O15428 100 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 FRS3O43559 492 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 B3GAT3O94766 335 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 IGSF6O95976 241 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 RHOCP08134 193 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 MELTFP08582 738 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 SNRPCP09234 159 aaKnown RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 CRABP1P29762 137 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 DVL1P1P54792 670 aaPredicted RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 BPIFB3P59826 476 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 RPS24P62847 133 aaKnown RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 PRKCZQ05513 592 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 PLA2G7Q13093 441 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 COL9A2Q14055 689 aaPredicted RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 MRM1Q6IN84 353 aaKnown RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 ZNF574Q6ZN55 896 aaPredicted RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 PPP1R3BQ86XI6 285 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 NRROSQ86YC3 692 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 GALNT16Q8N428 558 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 RFLNBQ8N5W9 214 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 C19orf47Q8N9M1 422 aaKnown RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 OR2L5Q8NG80 312 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 SECTM1Q8WVN6 248 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 OR8D1Q8WZ84 308 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 PHYHIPQ92561 330 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 PELI1Q96FA3 418 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 PDCD1LG2Q9BQ51 273 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 C20orf24Q9BUV8 137 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 ZNF426Q9BUY5 554 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 ATG5Q9H1Y0 275 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 RGCCQ9H4X1 137 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 PTGES2Q9H7Z7 377 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 CYTL1Q9NRR1 136 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 DOK5Q9P104 306 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 TRPC4Q9UBN4 977 aa7.87□□□□□ -1.15
LSM5-208ENST00000450169 MBD1Q9UIS9 605 aaPredicted RBP7.87□□□□□ -1.15
LSM5-208ENST00000450169 DNAJC25-GNG10A0A024R161 153 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ZNF726A6NNF4 738 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 H3BNC9 293 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 CXCL11O14625 94 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 XRCC3O43542 346 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 PRICKLE3O43900 615 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 PAPLNO95428 1278 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 AK1P00568 194 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 HLA-AP01891 365 aaKnown RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 CTSLP07711 333 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 OR4Q2P0C623 313 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ZGLP1P0C6A0 271 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 NDUFS1P28331 727 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 LPAR6P43657 344 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SULT1A1P50225 295 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 HNRNPKP61978 463 aaKnown RBP eCLIP7.86□□□□□ -1.15
LSM5-208ENST00000450169 SIRPAP78324 504 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 HSD11B2P80365 405 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 MEF2AQ02078 507 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 DECR1Q16698 335 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ALG11Q2TAA5 492 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 YOD1Q5VVQ6 348 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 NKAIN2Q5VXU1 208 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 STEAP1BQ6NZ63 245 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SPNS3Q6ZMD2 512 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SLCO4C1Q6ZQN7 724 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 TPGS1Q6ZTW0 290 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 OR52L1Q8NGH7 329 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ADAMTS17Q8TE56 1095 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 DNAJB3Q8WWF6 145 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 LCN9Q8WX39 176 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 RGP1Q92546 391 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 DVL3Q92997 716 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 FOXRED1Q96CU9 486 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 S100A13Q99584 98 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ADAM2Q99965 735 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SIRT7Q9NRC8 400 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 SIRT3Q9NTG7 399 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 LHX3Q9UBR4 397 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ADAM18Q9Y3Q7 739 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 POMT1Q9Y6A1 747 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 KIF26AQ9ULI4 1882 aaPredicted RBP7.86□□□□□ -1.15
LSM5-208ENST00000450169 A0A1W2PPE2 198 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 MEIS3P1A6NDR6 274 aa7.86□□□□□ -1.15
LSM5-208ENST00000450169 ADAM10O14672 748 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms