RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PPP1R3BQ86XI6 285 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 SIAH3Q8IW03 269 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 TOMM5Q8N4H5 51 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 TMEM99Q8N816 258 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ATOH1Q92858 354 aaPredicted RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ALG8Q9BVK2 526 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 RTN4RQ9BZR6 473 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 NANSQ9NR45 359 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ZNF337Q9Y3M9 751 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 KCNMB2Q9Y691 235 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 G3V3Q6 166 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 H2AFB2P0C5Z0 115 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 NPR2P20594 1047 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 TACR3P29371 465 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ZNF117Q03924 483 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ACSM1Q08AH1 577 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 SIGLEC14Q08ET2 396 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 FAM27D1Q5T7N8 215 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ZNF322Q6U7Q0 402 aaPredicted RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 OR2T4Q8NH00 348 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 ADAMTS14Q8WXS8 1223 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 FBXW5Q969U6 566 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 SMOC1Q9H4F8 434 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 CLEC4AQ9UMR7 237 aa12.86□□□□□ -0.35
LIMD1-202ENST00000440097 SIRT4Q9Y6E7 314 aaPredicted RBP12.86□□□□□ -0.35
LIMD1-202ENST00000440097 IGHA1P01876 353 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 SELENOPP49908 381 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 NRG3P56975 720 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 ERVK-25P63136 954 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 TUSC1Q2TAM9 212 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 CFAP77Q6ZQR2 320 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 OR52N1Q8NH53 320 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 ZMYND19Q96E35 227 aaPredicted RBP12.85□□□□□ -0.35
LIMD1-202ENST00000440097 KLHDC3Q9BQ90 382 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 METTL17Q9H7H0 456 aaPredicted RBP12.85□□□□□ -0.35
LIMD1-202ENST00000440097 SDHAF2Q9NX18 166 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 GDF9O60383 454 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 LCN1P31025 176 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 ADH7P40394 386 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 FNDC7Q5VTL7 733 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 OR5M10Q6IEU7 315 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 PYHIN1Q6K0P9 492 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 NLRC3Q7RTR2 1065 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 FAM71CQ8NEG0 241 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 OR6M1Q8NGM8 313 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 RADILQ96JH8 1075 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 NMNAT3Q96T66 252 aa12.85□□□□□ -0.35
LIMD1-202ENST00000440097 MS4A7Q9GZW8 240 aaPredicted RBP12.85□□□□□ -0.35
LIMD1-202ENST00000440097 CNOT1A5YKK6 2376 aaKnown RBP12.85□□□□□ -0.35
LIMD1-202ENST00000440097 A0A1W2PRG6 482 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 FZD7O75084 574 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 MT-ND4P03905 459 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 CXCR1P25024 350 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 AQP2P41181 271 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 SFXN4Q6P4A7 337 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 PLPP5Q8NEB5 264 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 OR6K6Q8NGW6 343 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 TRMT10AQ8TBZ6 339 aaKnown RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 YIPF5Q969M3 257 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 RASD2Q96D21 266 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 ZNF436Q9C0F3 470 aaPredicted RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 OCIAD1Q9NX40 245 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 IGKV1D-42A0A075B6H8 117 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 SLC25A12O75746 678 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 HPXP02790 462 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 ANKRD34CP0C6C1 535 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 NUP62P37198 522 aaPredicted RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 NAA10P41227 235 aaPredicted RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 EMP2P54851 167 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 RNF4P78317 190 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 DGCR2P98153 550 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 FHL1Q13642 323 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 ATG4DQ86TL0 474 aaPredicted RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 MAML2Q8IZL2 1156 aaPredicted RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 MOSPD2Q8NHP6 518 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 KISS1RQ969F8 398 aaPredicted RBP12.84□□□□□ -0.35
LIMD1-202ENST00000440097 C8orf44Q96CB5 159 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 MOGAT1Q96PD6 335 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 KIF25Q9UIL4 384 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 ICAM5Q9UMF0 924 aa12.84□□□□□ -0.35
LIMD1-202ENST00000440097 PCP4L1A6NKN8 68 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 J3QLW9 94 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 YKT6O15498 198 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 NUPL2O15504 423 aaKnown RBP12.83□□□□□ -0.36
LIMD1-202ENST00000440097 ALOX12BO75342 701 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 CER1O95813 267 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 HIST1H2ABP04908 130 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 F13BP05160 661 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 SBK2P0C263 348 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 TDGF1P13385 188 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 ZNF19P17023 458 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 MST1P26927 711 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 TSPAN5P62079 268 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 OPCMLQ14982 345 aa12.83□□□□□ -0.36
LIMD1-202ENST00000440097 HIST3H2AQ7L7L0 130 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms