RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 HDGFL3Q9Y3E1 203 aa5.44□□□□□ -1.54
NIF3L1-207ENST00000426253 MED12Q93074 2177 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 NUP214P35658 2090 aaPredicted RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 A0A096LPI6 279 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 A0A1W2PP18 115 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 A0A1W2PPR1 153 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 TMEM72A0PK05 275 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF724A8MTY0 619 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 DEFB108AA8MXU0 73 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 EVPLLA8MZ36 301 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF814B7Z6K7 855 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 C5orf58C9J3I9 102 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 NR5A2O00482 541 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 FAAHO00519 579 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 SMAD9O15198 467 aaKnown RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF208O43345 1280 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 PMS2P2O95744 297 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 FESP07332 822 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 PSMB1P20618 241 aaKnown RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 RPS4Y1P22090 263 aaKnown RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 NR4A1P22736 598 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 CXCR1P25024 350 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZFP36P26651 326 aaKnown RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 TACR3P29371 465 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ACAA2P42765 397 aaKnown RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ATP4BP51164 291 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 POLR2HP52434 150 aaKnown RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 COPZ1P61923 177 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 SLC35A1P78382 337 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 IRX1P78414 480 aaPredicted RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 SLC25A3Q00325 362 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 EPS8Q12929 822 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ITGADQ13349 1161 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 FHL3Q13643 280 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 SQLEQ14534 574 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 P2RY6Q15077 328 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 PDK3Q15120 406 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 TSC22D1Q15714 1073 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 LIN52Q52LA3 116 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF311Q5JNZ3 666 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 PAGE3Q5JUK9 113 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 LRIF1Q5T3J3 769 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 LIPNQ5VXI9 398 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 KLHL17Q6TDP4 642 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF836Q6ZNA1 936 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 GALNT5Q7Z7M9 940 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF440Q8IYI8 595 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF100Q8IYN0 542 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 IZUMO1Q8IYV9 350 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 CLIP4Q8N3C7 705 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 STEAP2Q8NFT2 490 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 TMEM171Q8WVE6 324 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 HSD17B8Q92506 261 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 DVL3Q92997 716 aaPredicted RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 MAL2Q969L2 176 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 PIGTQ969N2 578 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 DDIT4LQ96D03 193 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZHX1-C8orf76Q96EF9 292 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 TMEM19Q96HH6 336 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ARL5BQ96KC2 179 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 DOCK7Q96N67 2140 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF300Q96RE9 604 aaPredicted RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 NAA11Q9BSU3 229 aaPredicted RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 OR11A1Q9GZK7 315 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ACTR6Q9GZN1 396 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 OR10A4Q9H209 315 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 BCL2L10Q9HD36 194 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 SLC52A3Q9NQ40 469 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 TRIM36Q9NQ86 728 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 SLC25A37Q9NYZ2 338 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 TMEM181Q9P2C4 612 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 KIF17Q9P2E2 1029 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ZNF69Q9UC07 566 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 ING1Q9UK53 422 aaPredicted RBP5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 USP22Q9UPT9 525 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 IFT52Q9Y366 437 aa5.43□□□□□ -1.54
NIF3L1-207ENST00000426253 MED12LQ86YW9 2145 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 GPR171O14626 319 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 DHHO43323 396 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 DNPH1O43598 174 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 CD5LO43866 347 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 EIF1BO60739 113 aaKnown RBP5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 EDF1O60869 148 aaKnown RBP5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 GCM2O75603 506 aaPredicted RBP5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 PGM3O95394 542 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 HOXB9P17482 250 aaPredicted RBP5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 GPX2P18283 190 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 PPIBP23284 216 aaKnown RBP5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 IL32P24001 234 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 CCKARP32238 428 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 OR3A2P47893 321 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 NR1H2P55055 460 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 TIRAPP58753 221 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 H3F3AP84243 136 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 FADDQ13158 208 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 CEACAM7Q14002 265 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 CAPRIN1Q14444 709 aaKnown RBP5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 ACKR1Q16570 336 aa5.42□□□□□ -1.54
NIF3L1-207ENST00000426253 RUNDC3AQ59EK9 446 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms