RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CSF1P09603 554 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 DIO1P49895 249 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 SQSTM1Q13501 440 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 MOB3CQ70IA8 216 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 SLC35F3Q8IY50 421 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 CCDC36Q8IYA8 594 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 GALNT16Q8N428 558 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 POMGNT2Q8NAT1 580 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 OR4N2Q8NGD1 307 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 ALG12Q9BV10 488 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 RXFP3Q9NSD7 469 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 FAM96BQ9Y3D0 163 aa15.17■□□□□ 0.02
PKP4-204ENST00000421462 XRCC3O43542 346 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 CD34P28906 385 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 AVPR2P30518 371 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 SNRPEP62304 92 aaKnown RBP15.16■□□□□ 0.02
PKP4-204ENST00000421462 PLEKHN1Q494U1 663 aaPredicted RBP15.16■□□□□ 0.02
PKP4-204ENST00000421462 GLT8D1Q68CQ7 371 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 OR10K2Q6IF99 312 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 RBMS3Q6XE24 437 aaKnown RBP15.16■□□□□ 0.02
PKP4-204ENST00000421462 GATSQ8NAP1 163 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 MYADMQ96S97 322 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 CHRNA9Q9UGM1 479 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 TICRRQ7Z2Z1 1910 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 CTAG2O75638 210 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 CALCBP10092 127 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 VAMP1P23763 118 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 CCKBRP32239 447 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 SKP1P63208 163 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 PLAURQ03405 335 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 ILF3Q12906 894 aaKnown RBP eCLIP15.16■□□□□ 0.021e-6■■■■□ 19.5
PKP4-204ENST00000421462 PDZK1IP1Q13113 114 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 OR4S1Q8NGB4 309 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 OR10R2Q8NGX6 335 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 SMARCD2Q92925 531 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 PPP1R14AQ96A00 147 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 ZNF350Q9GZX5 532 aa15.16■□□□□ 0.02
PKP4-204ENST00000421462 GPN3Q9UHW5 284 aaPredicted RBP15.16■□□□□ 0.02
PKP4-204ENST00000421462 AGPAT2O15120 278 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 OR2T1O43869 369 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 ACTL6AO96019 429 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 F13BP05160 661 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 RD3LP0DJH9 198 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 CSF2RBP32927 897 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 CAPZA2P47755 286 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 PAN3Q58A45 887 aaKnown RBP15.15■□□□□ 0.02
PKP4-204ENST00000421462 LRRC69Q6ZNQ3 347 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 PRSS41Q7RTY9 318 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 RD3Q7Z3Z2 195 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 BIVMQ86UB2 503 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 GTPBP8Q8N3Z3 284 aaPredicted RBP15.15■□□□□ 0.02
PKP4-204ENST00000421462 LINC00469Q8N7U9 141 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 OR6N2Q8NGY6 317 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 C10orf90Q96M02 699 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 KLF2Q9Y5W3 355 aaPredicted RBP15.15■□□□□ 0.02
PKP4-204ENST00000421462 A0A0D9SG52 128 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 EIF3GO75821 320 aaKnown RBP eCLIP15.15■□□□□ 0.02
PKP4-204ENST00000421462 CXCL14O95715 111 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 DCNP07585 359 aaKnown RBP15.15■□□□□ 0.02
PKP4-204ENST00000421462 DHCR24Q15392 516 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 NKAIN2Q5VXU1 208 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 PM20D2Q8IYS1 436 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 OR5T3Q8NGG3 340 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 C14orf105Q9NVL8 296 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 MKL2Q9ULH7 1088 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 A0A0B4J2A0 478 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 EIF4E2O60573 245 aaKnown RBP15.15■□□□□ 0.02
PKP4-204ENST00000421462 DHRS2Q13268 280 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 RUNX2Q13950 521 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 NR0B2Q15466 257 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 C3orf33Q6P1S2 294 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 GABRG1Q8N1C3 465 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 NPEPL1Q8NDH3 523 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 RXFP4Q8TDU9 374 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 SFT2D1Q8WV19 159 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 TMED6Q8WW62 240 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 CMTM3Q96MX0 182 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 LMAN2LQ9H0V9 348 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 PIGMQ9H3S5 423 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 OR2S2Q9NQN1 319 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 ZNF629Q9UEG4 869 aaPredicted RBP15.15■□□□□ 0.02
PKP4-204ENST00000421462 SHPKQ9UHJ6 478 aa15.15■□□□□ 0.02
PKP4-204ENST00000421462 NOTCH4Q99466 2003 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 FITM1A5D6W6 292 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 RNGTTO60942 597 aaKnown RBP15.14■□□□□ 0.01
PKP4-204ENST00000421462 THBS1P07996 1170 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 EPCAMP16422 314 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 AGTR1P30556 359 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 PBX2P40425 430 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 CCR4P51679 360 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 ALKBH1Q13686 389 aaKnown RBP15.14■□□□□ 0.01
PKP4-204ENST00000421462 C2orf76Q3KRA6 126 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 KIRREL2Q6UWL6 708 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 DPY19L4Q7Z388 723 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 UTP23Q9BRU9 249 aaKnown RBP15.14■□□□□ 0.01
PKP4-204ENST00000421462 SLC19A3Q9BZV2 496 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 EML5Q05BV3 1969 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 A0A0B4J2E0 115 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 A0A1B0GX12 115 aa15.14■□□□□ 0.01
PKP4-204ENST00000421462 AGR2O95994 175 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms