RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MARCH8Q5T0T0 291 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 LYSMD4Q5XG99 296 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TRIQKQ629K1 86 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TWF2Q6IBS0 349 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR4F3Q6IEY1 312 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TRAT1Q6PIZ9 186 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 FIP1L1Q6UN15 594 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 SBSNQ6UWP8 590 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 FAM131AQ6UXB0 335 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RFPL4BQ6ZWI9 263 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 BTN2A1Q7KYR7 527 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 LRRC70Q7Z2Q7 622 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 NRARPQ7Z6K4 114 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 LUZP2Q86TE4 346 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ASPGQ86U10 573 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 HS3ST5Q8IZT8 346 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CYP4Z2PQ8N1L4 340 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 LINC00471Q8N535 108 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ARL6IP6Q8N6S5 226 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 Q8N9G6 341 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 SLC37A3Q8NCC5 494 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 C19orf18Q8NEA5 215 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PROKR2Q8NFJ6 384 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR10G2Q8NGC3 310 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR4K2Q8NGD2 314 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR52B6Q8NGF0 335 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR8J2Q8NGG1 315 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR4A15Q8NGL6 344 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR13C4Q8NGS5 318 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CD200R1Q8TD46 325 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SMAP2Q8WU79 429 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 EEF1AKMT1Q8WVE0 214 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 APOBEC4Q8WW27 367 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 METTL21AQ8WXB1 218 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 GEMIN6Q8WXD5 167 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 DEDD2Q8WXF8 326 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 NDRG1Q92597 394 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 MYLPFQ96A32 169 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SLC25A46Q96AG3 418 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CREB3L1Q96BA8 519 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PYCR2Q96C36 320 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TMEM80Q96HE8 168 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SPATA17Q96L03 361 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 C7orf34Q96L11 122 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 FCRL1Q96LA6 429 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 NECTIN4Q96NY8 510 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 VPS35Q96QK1 796 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PSKH2Q96QS6 385 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SDHCQ99643 169 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 LPAR4Q99677 370 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 MGLLQ99685 303 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 NKX3-1Q99801 234 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 TBCDQ9BTW9 1192 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 DOHHQ9BU89 302 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TAPBPLQ9BX59 468 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 BBS2Q9BXC9 721 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ZNF717Q9BY31 904 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 PRRG3Q9BZD7 231 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 OR51E2Q9H255 320 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 PIGUQ9H490 435 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ELOVL6Q9H5J4 265 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 ANKRA2Q9H9E1 313 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 FOLH1BQ9HBA9 442 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 EXD2Q9NVH0 621 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 NDUFB11Q9NX14 153 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 VNN3Q9NY84 501 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TAS2R7Q9NYW3 318 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SLC25A37Q9NYZ2 338 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 EMC3Q9P0I2 261 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 COPZ2Q9P299 210 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RABL2AQ9UBK7 228 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 ZNF282Q9UDV7 671 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 GLS2Q9UI32 602 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 BTNL2Q9UIR0 455 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ZNF490Q9ULM2 529 aaPredicted RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 TMCC3Q9ULS5 477 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ING4Q9UNL4 249 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ABCG2Q9UNQ0 655 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RABL2BQ9UNT1 228 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 SCML2Q9UQR0 700 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 EXOGQ9Y2C4 368 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 GSTK1Q9Y2Q3 226 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RPL36Q9Y3U8 105 aaKnown RBP2.29□□□□□ -2.04
VPS41-206ENST00000418457 AUP1Q9Y679 476 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 ARL5AQ9Y689 179 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 CSNK1G3Q9Y6M4 447 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 RNF215Q9Y6U7 377 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 U3KQV3 271 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 V9GYH0 126 aa2.29□□□□□ -2.04
VPS41-206ENST00000418457 TRPM7Q96QT4 1865 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 A0A1B0GVI7 797 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 FAM240BA0A1B0GVZ2 78 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 C12orf71A8MTZ7 269 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 C2CD4DB7Z1M9 353 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 F5H5T6 163 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 hCG_2039718K7EN88 272 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 SGK494L7N484 410 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 CCL24O00175 119 aa2.28□□□□□ -2.04
VPS41-206ENST00000418457 HAS3O00219 553 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms