RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 MAP2K6P52564 334 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 SLC25A1P53007 311 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 RPL18Q07020 188 aaKnown RBP8.93□□□□□ -0.98
SS18-203ENST00000415083 HYAL1Q12794 435 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 Q499Y3 187 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 MANEAQ5SRI9 462 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 TMEM69Q5SWH9 247 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 FAM166AQ6J272 317 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 TMEM205Q6UW68 189 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 MDGA2Q7Z553 956 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 STPG2Q8N412 459 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 OR2G2Q8NGZ5 317 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ACTR6Q9GZN1 396 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 C12orf4Q9NQ89 552 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 RXFP3Q9NSD7 469 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 CLEC1BQ9P126 229 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 UBQLN2Q9UHD9 624 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 NMBP08949 121 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 CALCBP10092 127 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 CTHP32929 405 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 CAPZA2P47755 286 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 GPR143P51810 404 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 BTN1A1Q13410 526 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 HLXQ14774 488 aaPredicted RBP8.93□□□□□ -0.98
SS18-203ENST00000415083 ZNF550Q7Z398 422 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 PTPMT1Q8WUK0 201 aaPredicted RBP8.93□□□□□ -0.98
SS18-203ENST00000415083 FCAMRQ8WWV6 532 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 SLC25A28Q96A46 364 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 S1PR5Q9H228 398 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 KCNG2Q9UJ96 466 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 RAD1O60671 282 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 CTAG2O75638 210 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ZNF10P21506 573 aaPredicted RBP8.93□□□□□ -0.98
SS18-203ENST00000415083 CTXN1P60606 82 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 FZD2Q14332 565 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ZMYND11Q15326 602 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ETFDHQ16134 617 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.93□□□□□ -0.98
SS18-203ENST00000415083 WDR38Q5JTN6 314 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 MED25Q71SY5 747 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 DPY19L4Q7Z388 723 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 RTN4RL2Q86UN3 420 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ADGRG3Q86Y34 549 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ELMOD3Q96FG2 381 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 RADILQ96JH8 1075 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 NPAS1Q99742 590 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 GSX2Q9BZM3 304 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 DIABLOQ9NR28 239 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 GPR27Q9NS67 375 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ZNF69Q9UC07 566 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 FREM3P0C091 2139 aa8.93□□□□□ -0.98
SS18-203ENST00000415083 ZNF254O75437 659 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 LPLP06858 475 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 CD14P08571 375 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 ATXN8OSP0DMR3 200 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 GABRG2P18507 467 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 SDHAP31040 664 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 ILF3Q12906 894 aaKnown RBP eCLIP8.92□□□□□ -0.98
SS18-203ENST00000415083 TUSC1Q2TAM9 212 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 METTL11BQ5VVY1 283 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 MCATQ8IVS2 390 aaKnown RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 MUC20Q8N307 709 aaPredicted RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 OR51D1Q8NGF3 324 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 OR5AK2Q8NH90 309 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 PHYHIPQ92561 330 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 DVL3Q92997 716 aaPredicted RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 SEMA6CQ9H3T2 930 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 MRPL22Q9NWU5 206 aaKnown RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 EMC3Q9P0I2 261 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 OPN4Q9UHM6 478 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 TRAV14DV4A0A0A6YYC5 116 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 LOC101059948A0A1B0GTJ6 334 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 TCRBV16S1A1N1A0A5B0 115 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 H3BMH7 237 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 H7C417 338 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 SIGLEC5O15389 551 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 GMFGO60234 142 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 FBXO45P0C2W1 286 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 EN2P19622 333 aaPredicted RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 MFGE8Q08431 387 aaPredicted RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 SIGLEC14Q08ET2 396 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 C19orf47Q8N9M1 422 aaKnown RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 RELTQ969Z4 430 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 PTDSS2Q9BVG9 487 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 MTFP1Q9UDX5 166 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 ZNF230Q9UIE0 474 aaPredicted RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 SLC22A13Q9Y226 551 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 FKBP7Q9Y680 259 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 GON4LQ3T8J9 2241 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 RP1P56715 2156 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 EXPH5Q8NEV8 1989 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 TEX51A0A1B0GUA7 166 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 M0R233 179 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 LGALS8O00214 317 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 XRCC3O43542 346 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 SULT1B1O43704 296 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 KHDRBS3O75525 346 aaKnown RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 IGF2P01344 180 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 IL5P05113 134 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 GIPP09681 153 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms