RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CD8BP10966 210 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 PRF1P14222 555 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 HIST1H1CP16403 213 aaKnown RBP11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 CXCR1P25024 350 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 BLVRAP53004 296 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 EMP2P54851 167 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 RPS4XP62701 263 aaKnown RBP11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 PITPNAQ00169 270 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 PLAURQ03405 335 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF85Q03923 595 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 IL18Q14116 193 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 SSPNQ14714 243 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 TAB1Q15750 504 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF79Q15937 498 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 CDONQ4KMG0 1287 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 DMKNQ6E0U4 476 aaPredicted RBP11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 JMJD6Q6NYC1 403 aaPredicted RBP11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ARL9Q6T311 187 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 TRILQ7L0X0 811 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 CEACAM19Q7Z692 300 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ATG4DQ86TL0 474 aaPredicted RBP11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 THAP4Q8WY91 577 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 TBX5Q99593 518 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 SOSTQ9BQB4 213 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 CRB3Q9BUF7 120 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 OR8D2Q9GZM6 311 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ENKD1Q9H0I2 346 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ISG20L2Q9H9L3 353 aaKnown RBP11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 FKRPQ9H9S5 495 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 TIGARQ9NQ88 270 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 C14orf119Q9NWQ9 140 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 ABRACLQ9P1F3 81 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 DTX4Q9Y2E6 619 aa11.67□□□□□ -0.54
SMARCB1-203ENST00000407082 A0A1W2PQ09 198 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 A6NL46 340 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC25A12O75746 678 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF432O94892 652 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 MT-ATP6P00846 226 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 HLA-DQB1P01920 261 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 IGKV3-11P04433 115 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 UMODP07911 640 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 PTNP21246 168 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 PYCR1P32322 319 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 CD79BP40259 229 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 HTR3AP46098 478 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 TGM4P49221 684 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 CCR4P51679 360 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 SIRPAP78324 504 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 SKP2Q13309 424 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 CBFBQ13951 182 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 EFR3AQ14156 821 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 QPRTQ15274 297 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF74Q16587 644 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 FAAH2Q6GMR7 532 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 CNIH2Q6PI25 160 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 TMEM91Q6ZNR0 172 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 Q8N402 240 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 IL17RDQ8NFM7 739 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 OR1N1Q8NGS0 311 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 OR4K13Q8NH42 304 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 MOSPD2Q8NHP6 518 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 ZNF721Q8TF20 911 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 ADIPOR1Q96A54 375 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 ZC3HAV1LQ96H79 300 aaKnown RBP11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 SNX18Q96RF0 628 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 TBL1XR1Q9BZK7 514 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 VN1R1Q9GZP7 353 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 TBC1D24Q9ULP9 559 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 TMEM14AQ9Y6G1 99 aa11.66□□□□□ -0.54
SMARCB1-203ENST00000407082 ALG1L2C9J202 215 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 MCIDASD6RGH6 385 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 NDUFB5O43674 189 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 IGHEP01854 428 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 MRPL3P09001 348 aaKnown RBP11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 CSF3P09919 207 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 SPI1P17947 270 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 RAB3BP20337 219 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 SDHAP31040 664 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 OTX2P32243 289 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 CASP3P42574 277 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 NR4A2P43354 598 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 TPTEP56180 551 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC3A1Q07837 685 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 PLCXD2Q0VAA5 305 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 FHL1Q13642 323 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 NSDHLQ15738 373 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 BAK1Q16611 211 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 ACSM3Q53FZ2 586 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 ALG10Q5BKT4 473 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 IDNKQ5T6J7 187 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 PLET1Q6UQ28 207 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC16A9Q7RTY1 509 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 NANOGNBQ7Z5D8 188 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 PXKQ7Z7A4 578 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 UBQLNLQ8IYU4 475 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 CISD2Q8N5K1 135 aaKnown RBP11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 CYB561A3Q8NBI2 242 aa11.65□□□□□ -0.54
SMARCB1-203ENST00000407082 NPEPL1Q8NDH3 523 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms