RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GNA13Q14344 377 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SMU1Q2TAY7 513 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 PCGF3Q3KNV8 242 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TMEM154Q6P9G4 183 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 LRRC34Q8IZ02 419 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 KIR3DL3Q8N743 410 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZNF781Q8N8C0 355 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SYNPRQ8TBG9 265 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SLC38A5Q8WUX1 472 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CCL17Q92583 94 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 POP5Q969H6 163 aaKnown RBP10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 APOPT1Q96IL0 206 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MOGAT1Q96PD6 335 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SH3GL3Q99963 347 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CITED1Q99966 193 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GAL3ST1Q99999 423 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 WFDC6Q9BQY6 131 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 UBAP1Q9NZ09 502 aa10.04□□□□□ -0.8
SPTLC1P3-201ENST00000403408 A0A087WUJ7 227 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 A0A1B0GWA3 101 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZSCAN5BA6NJL1 495 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TM9SF1O15321 606 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GPANK1O95872 356 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 BGLAPP02818 100 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 BCHEP06276 602 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 S100A3P33764 101 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MPV17P39210 176 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MMP15P51511 669 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MAD2L1Q13257 205 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GTDC1Q4AE62 458 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 FAM69AQ5T7M9 428 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 LRFN4Q6PJG9 635 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZNF621Q6ZSS3 439 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 UEVLDQ8IX04 471 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 CNPY4Q8N129 248 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 GLB1L3Q8NCI6 653 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ADPRHL1Q8NDY3 354 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SLC30A7Q8NEW0 376 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 MGARPQ8TDB4 240 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TCP10LQ8TDR4 215 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 VPS33AQ96AX1 596 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TMEM19Q96HH6 336 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SPATA9Q9BWV2 254 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ULBP2Q9BZM5 246 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 ZMAT3Q9HA38 289 aaKnown RBP10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 SAP30LQ9HAJ7 183 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TCF7L2Q9NQB0 619 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 POLR3KQ9Y2Y1 108 aaPredicted RBP10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 INSIG2Q9Y5U4 225 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 AUP1Q9Y679 476 aa10.03□□□□□ -0.8
SPTLC1P3-201ENST00000403408 TRAV36DV7A0A075B6V5 113 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 E9PBE3 544 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SPRY3O43610 288 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TPST2O60704 377 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MFN2O95140 757 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 UBL3O95164 117 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 IGHV3-13P01766 116 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 IGHV2-70P01814 119 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 LCKP06239 509 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 BPGMP07738 259 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CD80P33681 288 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PCGF2P35227 344 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ETV4P43268 484 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ATP4BP51164 291 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 UCP2P55851 309 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PAX2Q02962 417 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 RBBP4Q09028 425 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 HFEQ30201 348 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MMEL1Q495T6 779 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ARMCX4Q5H9R4 360 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ASPHD2Q6ICH7 369 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MIER2Q8N344 545 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLC22A24Q8N4F4 322 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ZNF519Q8TB69 540 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 GEMIN6Q8WXD5 167 aaKnown RBP10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 RAB1CQ92928 201 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TMEM54Q969K7 222 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLC25A28Q96A46 364 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PANX1Q96RD7 426 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DENND2DQ9H6A0 471 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PRDM4Q9UKN5 801 aa10.02□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ISPDA4D126 451 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 F5H0A9 414 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PLPP3O14495 311 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 IGHMP01871 453 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 GTF2E2P29084 291 aaKnown RBP10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SERPINB5P36952 375 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 WNT5AP41221 380 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLC6A9P48067 706 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TEKQ02763 1124 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PAX8Q06710 450 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SPATA46Q5T0L3 261 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 C16orf87Q6PH81 154 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 C9orf139Q6ZV77 190 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SPATC1Q76KD6 591 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ZNF101Q8IZC7 436 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ICA1LQ8NDH6 482 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CPEB3Q8NE35 698 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms