RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 RAB36O95755 333 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 CELA3BP08861 270 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 CD79AP11912 226 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 HLA-DOBP13765 273 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 NR4A1P22736 598 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 PCGF2P35227 344 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 GLRXP35754 106 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 MTPNP58546 118 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 GALK2Q01415 458 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 CAMK2DQ13557 499 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 CYLC2Q14093 348 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF74Q16587 644 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 DUSP7Q16829 419 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 HDDC2Q7Z4H3 204 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 LSRQ86X29 649 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF786Q8N393 782 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 ANKS4BQ8N8V4 417 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 OR6T1Q8NGN1 323 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 ADAMTS16Q8TE57 1224 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 HPS1Q92902 700 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 MOGAT1Q96PD6 335 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 POLR2J2Q9GZM3 115 aaKnown RBP11.23□□□□□ -0.61
RPAIN-202ENST00000381208 POLR2J3Q9H1A7 115 aaKnown RBP11.23□□□□□ -0.61
RPAIN-202ENST00000381208 MS4A5Q9H3V2 200 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF385DQ9H6B1 395 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 NANSQ9NR45 359 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF229Q9UJW7 825 aa11.23□□□□□ -0.61
RPAIN-202ENST00000381208 M0R3H8 397 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 SYNGR3O43761 229 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 FARS2O95363 451 aaKnown RBP11.22□□□□□ -0.61
RPAIN-202ENST00000381208 NPPAP01160 153 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 HLA-HP01893 362 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 DAOP14920 347 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF14P17017 642 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF16P17020 682 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-202ENST00000381208 CD247P20963 164 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 CHN2P52757 468 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 RAB1AP62820 205 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 NPTX1Q15818 432 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 NRN1LQ496H8 165 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 ENTPD8Q5MY95 495 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 SLC35D2Q76EJ3 337 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 CCDC80Q76M96 950 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 SVOPLQ8N434 492 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 GPR32P1Q8NGA4 272 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 UBASH3BQ8TF42 649 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF566Q969W8 418 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 MRPL24Q96A35 216 aaKnown RBP11.22□□□□□ -0.61
RPAIN-202ENST00000381208 SLC25A44Q96H78 314 aaPredicted RBP11.22□□□□□ -0.61
RPAIN-202ENST00000381208 TXNDC15Q96J42 360 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 BPESC1Q9GZL8 116 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 C1orf198Q9H425 327 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 SEC61A2Q9H9S3 476 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 GLTPQ9NZD2 209 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 STX18Q9P2W9 335 aaKnown RBP11.22□□□□□ -0.61
RPAIN-202ENST00000381208 BAG5Q9UL15 447 aa11.22□□□□□ -0.61
RPAIN-202ENST00000381208 FBN1P35555 2871 aaKnown RBP11.22□□□□□ -0.61
RPAIN-202ENST00000381208 YLPM1P49750 1951 aaKnown RBP11.21□□□□□ -0.61
RPAIN-202ENST00000381208 IGHV4-61A0A0C4DH41 118 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 SLC22A23A1A5C7 686 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF503-AS2A6NEH8 195 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 CPSF4LA6NMK7 179 aaKnown RBP11.21□□□□□ -0.61
RPAIN-202ENST00000381208 CENPBD1B2RD01 187 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 C11orf98E9PRG8 122 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 M0R233 179 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 RNF13O43567 381 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 EDF1O60869 148 aaKnown RBP11.21□□□□□ -0.61
RPAIN-202ENST00000381208 SEC14L2O76054 403 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 CH25HO95992 272 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 PTHP01270 115 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 IGF2P01344 180 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 IFNA14P01570 189 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 OPN1SWP03999 348 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 TACSTD2P09758 323 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 OR8G3PP0DMU2 310 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF35P13682 527 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 IFNGR1P15260 489 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 B4GALT1P15291 398 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 SRD5A1P18405 259 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 PCMT1P22061 227 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 BIDP55957 195 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 SELENOVP59797 346 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 VMACQ2NL98 169 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 COQ5Q5HYK3 327 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 PHYHD1Q5SRE7 291 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 GKAP1Q5VSY0 366 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-202ENST00000381208 KRT80Q6KB66 452 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 MYPOPQ86VE0 399 aaPredicted RBP11.21□□□□□ -0.61
RPAIN-202ENST00000381208 RETREG3Q86VR2 466 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 OR10A6Q8NH74 314 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 TMEM54Q969K7 222 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 MSI2Q96DH6 328 aaKnown RBP11.21□□□□□ -0.61
RPAIN-202ENST00000381208 WFDC6Q9BQY6 131 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 ZNF426Q9BUY5 554 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 NPHS2Q9NP85 383 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.61
RPAIN-202ENST00000381208 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.62
RPAIN-202ENST00000381208 A0A0G2JND7 137 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 TMEM129A0AVI4 362 aa11.2□□□□□ -0.62
RPAIN-202ENST00000381208 HTR3EA5X5Y0 456 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms