RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 LMAN1LQ9HAT1 526 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 TAS2R13Q9NYV9 303 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 RHCGQ9UBD6 479 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 TESQ9UGI8 421 aaKnown RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 TMED3Q9Y3Q3 217 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 FLVCR1Q9Y5Y0 555 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 SCN1AP35498 2009 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 UPK3BL1B0FP48 263 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 UPK3BL2E5RIL1 263 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF264O43296 627 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 FBXO24O75426 580 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 CD5P06127 495 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 CACNG1Q06432 222 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 SLC10A7Q0GE19 358 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF791Q3KP31 576 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 MOGAT2Q3SYC2 334 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 SYT14P1Q58G82 188 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 HORMAD2Q8N7B1 307 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 SIDT2Q8NBJ9 832 aaKnown RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 OR4D9Q8NGE8 314 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 OR5AP2Q8NGF4 316 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 SMARCD1Q96GM5 515 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 INTS14Q96SY0 518 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 RAB33BQ9H082 229 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 KLK11Q9UBX7 282 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 A0A1W2PQ45 241 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 A0A1W2PQY0 241 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 CHRM4P08173 479 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 IL6RP08887 468 aaPredicted RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 LIMS3P0CW19 117 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 LIMS4P0CW20 117 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 OSMP13725 252 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 GDF5P43026 501 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 MAPK9P45984 424 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 GIPRP48546 466 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 CCR5P51681 352 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 WDR5P61964 334 aaKnown RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 HENMT1Q5T8I9 393 aaKnown RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 C11orf87Q6NUJ2 197 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 FAM216AQ8WUB2 273 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 ASB6Q9NWX5 421 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 LPAR3Q9UBY5 353 aa8.58□□□□□ -1.04
PTPRA-204ENST00000380393 EXOSC1Q9Y3B2 195 aaKnown RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 RBM7Q9Y580 266 aaKnown RBP8.58□□□□□ -1.04
PTPRA-204ENST00000380393 KCNAB3O43448 404 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 PGA3P0DJD8 388 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 HLA-GP17693 338 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 CD1CP29017 333 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 TAF6P49848 677 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 DVL1P1P54792 670 aaPredicted RBP8.57□□□□□ -1.04
PTPRA-204ENST00000380393 ADNP2Q6IQ32 1131 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 CD300LFQ8TDQ1 290 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 MAL2Q969L2 176 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 MYEOVQ96EZ4 313 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 CDKN2AIPNLQ96HQ2 116 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 PGAM5Q96HS1 289 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 SMIM8Q96KF7 97 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 FCRL2Q96LA5 508 aaPredicted RBP8.57□□□□□ -1.04
PTPRA-204ENST00000380393 DEFB118Q96PH6 123 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 ACER3Q9NUN7 267 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 TMEM161AQ9NX61 479 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 MYBPHLA2RUH7 354 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 CNOT4O95628 575 aaKnown RBP8.57□□□□□ -1.04
PTPRA-204ENST00000380393 CPSF4O95639 269 aaKnown RBP8.57□□□□□ -1.04
PTPRA-204ENST00000380393 TGFB1P01137 390 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 TRGC2P03986 189 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 RPN2P04844 631 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 OR4A8P0C604 315 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 RAB6AP20340 208 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 CAPZBP47756 277 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 RAB7AP51149 207 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 PAX5Q02548 391 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 C17orf67Q0P5P2 114 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 RHEBQ15382 184 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 RPE65Q16518 533 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 GUK1Q16774 197 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 SIRPB2Q5JXA9 342 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 DCST1Q5T197 706 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 MARC1Q5VT66 337 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 TEX38Q6PEX7 206 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 TMPPEQ6ZT21 453 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 GALNTL5Q7Z4T8 443 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 LYG1Q8N1E2 194 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 MFSD9Q8NBP5 474 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 OR4S1Q8NGB4 309 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 EEF1AKMT1Q8WVE0 214 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF582Q96NG8 517 aaPredicted RBP8.57□□□□□ -1.04
PTPRA-204ENST00000380393 PANX1Q96RD7 426 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 RDH14Q9HBH5 336 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 MTCH2Q9Y6C9 303 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 XIRP2A4UGR9 3374 aa8.57□□□□□ -1.04
PTPRA-204ENST00000380393 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 DHRS7CA6NNS2 312 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 H7C417 338 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 M0QZ24 198 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 ACOT7O00154 380 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 OR1F1O43749 312 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 OR12D1P0DN82 309 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 FDXRP22570 491 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms