RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 LURAP1Q96LR2 239 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 TXN2Q99757 166 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 ZNF593O00488 134 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 ELAVL4P26378 380 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 IL2RGP31785 369 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 CCR9P51686 369 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 EEF1A1P68104 462 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 HBG1P69891 147 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 HBG2P69892 147 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 SMAD4Q13485 552 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OR10K2Q6IF99 312 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 EID2Q8N6I1 236 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OR13C9Q8NGT0 318 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OR52N1Q8NH53 320 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 KCNG3Q8TAE7 436 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 UBE2ZQ9H832 354 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 MMP17Q9ULZ9 603 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 TRABD2BA6NFA1 517 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 TNFRSF10CO14798 259 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 PPP1R2P9O14990 202 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 CD53P19397 219 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 TBPL2Q6SJ96 375 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OR5L1Q8NGL2 311 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 SLC41A2Q96JW4 573 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 GPR78Q96P69 363 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 VN1R3Q9BXE9 311 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 OR52A5Q9H2C5 316 aa11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 PURGQ9UJV8 347 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 MCTS1Q9ULC4 181 aaKnown RBP11.34□□□□□ -0.59
NPLOC4-202ENST00000374747 LRIT2A6NDA9 550 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 SULT1B1O43704 296 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 SMIM18P0DKX4 95 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 BCKDHBP21953 392 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 PIGAP37287 484 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 CASP6P55212 293 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 CATR1Q13166 79 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 ZNF266Q14584 549 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 C11orf91Q3C1V1 193 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 TMEM207Q6UWW9 146 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 TMPRSS7Q7RTY8 843 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 MITD1Q8WV92 249 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 PIGCQ92535 297 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 ARHGAP9Q9BRR9 750 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 ANKRD34BA5PLL1 514 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 BHLHE40O14503 412 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 ALX3O95076 343 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 C1QBP02746 253 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 DCAF7P61962 342 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 PELI3Q8N2H9 469 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 LRIT1Q9P2V4 623 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 FZD6O60353 706 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 PAPLNO95428 1278 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 CLEC2LP0C7M8 214 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 NDUFA6P56556 154 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 ATPAF1Q5TC12 328 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 AADACL3Q5VUY0 350 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 SLX4IPQ5VYV7 408 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 Q6ZSR9 355 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 MDGA2Q7Z553 956 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 NIPSNAP1Q9BPW8 284 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 SLC25A21Q9BQT8 299 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 OR11A1Q9GZK7 315 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 ENKD1Q9H0I2 346 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 RGPD3A6NKT7 1758 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 RGPD4Q7Z3J3 1758 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 SLC5A10A0PJK1 596 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 CER1O95813 267 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 KDM4DQ6B0I6 523 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 TMEFF1Q8IYR6 380 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 YIPF5Q969M3 257 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 ANKRD9Q96BM1 317 aaPredicted RBP11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 UQCC2Q9BRT2 126 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 ULBP2Q9BZM5 246 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 C1orf198Q9H425 327 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 WDR76Q9H967 626 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
NPLOC4-202ENST00000374747 TAPBPO15533 448 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 ZNF264O43296 627 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 OR7C1O76099 320 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 GLULP15104 373 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 ADPRHP54922 357 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 TMEM201Q5SNT2 666 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 LANCL3Q6ZV70 420 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 SLC35D2Q76EJ3 337 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 OR52H1Q8NGJ2 320 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 TNFRSF13CQ96RJ3 184 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 GSX2Q9BZM3 304 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 PIGMQ9H3S5 423 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 SLC39A9Q9NUM3 307 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 MRPS28Q9Y2Q9 187 aaKnown RBP11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 GALR3O60755 368 aaPredicted RBP11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 OLFM2O95897 454 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 FURINP09958 794 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 FCGR2AP12318 317 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 MAKP20794 623 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 REEP5Q00765 189 aa11.32□□□□□ -0.6
NPLOC4-202ENST00000374747 LPCAT3Q6P1A2 487 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms