RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 TNFRSF1BP20333 461 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NPR2P20594 1047 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 USF1P22415 310 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 RBM34P42696 430 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CSNK1A1P48729 337 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NPRL3Q12980 569 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MAPRE2Q15555 327 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 GSG1Q2KHT4 349 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MMEL1Q495T6 779 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ERICH5Q6P6B1 374 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 VHLLQ6RSH7 139 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SNX32Q86XE0 403 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ZNF584Q8IVC4 421 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SKA3Q8IX90 412 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ANKS4BQ8N8V4 417 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 OR6N1Q8NGY5 312 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FGFBP3Q8TAT2 258 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MRPL13Q9BYD1 178 aaKnown RBP11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 RIMS3Q9UJD0 308 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FBXO9Q9UK97 447 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 BAG5Q9UL15 447 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 POFUT2Q9Y2G5 429 aa11.81□□□□□ -0.52
TNFRSF1A-202ENST00000366159 LOC390937A0A1W2PQ73 354 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FAM220BPB1ANY3 271 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 KPNA4O00629 521 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SLC22A2O15244 555 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SERPINI2O75830 405 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 OR5F1O95221 314 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 OR6A2O95222 327 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CD79AP11912 226 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 KDELR2P33947 212 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NR4A2P43354 598 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CAPZA2P47755 286 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PDLIM4P50479 330 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ZNF133P52736 654 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 UGT2B15P54855 530 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 RAB1AP62820 205 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 GUCY1A3Q02108 690 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 RUNX1T1Q06455 604 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PIGFQ07326 219 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PIN1Q13526 163 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 DAG1Q14118 895 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FXNQ16595 210 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SLC22A24Q8N4F4 322 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 TMEM255BQ8WV15 326 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ZNF566Q969W8 418 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FOXN4Q96NZ1 517 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 VRK1Q99986 396 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MYOZ1Q9NP98 299 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 C20orf141Q9NUB4 165 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 GID8Q9NWU2 228 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FKBP7Q9Y680 259 aa11.8□□□□□ -0.52
TNFRSF1A-202ENST00000366159 hCG_2039718K7EN88 272 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 DHHO43323 396 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 RNF13O43567 381 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SHOX2O60902 331 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 VIMP08670 466 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 THRBP10828 461 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FUT1P19526 365 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 GIFP27352 417 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 OR1E2P47887 323 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 GIPRP48546 466 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 EVX1P49640 407 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 LSM11P83369 360 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 RPL18Q07020 188 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SF3A3Q12874 501 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SNTB2Q13425 540 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MELKQ14680 651 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 KRT80Q6KB66 452 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 C8orf82Q6P1X6 216 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CDK20Q8IZL9 346 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 ZCCHC24Q8N2G6 241 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SVOPLQ8N434 492 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PCYOX1LQ8NBM8 494 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PFN4Q8NHR9 129 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 TMEM239Q8WW34 195 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 MRPL24Q96A35 216 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 TMEM38BQ9NVV0 291 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CMTM6Q9NX76 183 aa11.79□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NPIPB13A6NJU9 1138 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 VSTM5A8MXK1 200 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 CENPBD1B2RD01 187 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 NPIPB4C9JG80 1138 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 BLOC1S5-TXNDC5H3BN57 136 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 OR7A10O76100 309 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 UBL3O95164 117 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 STAMBPO95630 424 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 BCL10O95999 233 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 IFNA14P01570 189 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 HIST1H2ABP04908 130 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SERPINA5P05154 406 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 QDPRP09417 244 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PATE4P0C8F1 98 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 FUT4P22083 530 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 GLRXP35754 106 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 PTDSS1P48651 473 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 TAS2R41P59536 307 aa11.78□□□□□ -0.52
TNFRSF1A-202ENST00000366159 SELENOWP63302 87 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms