RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 E9PI62 339 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 HSD17B6O14756 317 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 EIF2DP41214 584 aaKnown RBP21.3■■□□□ 1
NPAS3-201ENST00000346562 B3GNT9Q6UX72 402 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 GRINAQ7Z429 371 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 C15orf54Q8N8G6 183 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 RAB22AQ9UL26 194 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 PHF1O43189 567 aaPredicted RBP21.3■■□□□ 1
NPAS3-201ENST00000346562 FOSL1P15407 271 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 MAKP20794 623 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 TMEM64Q6YI46 380 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 MAML2Q8IZL2 1156 aaPredicted RBP21.3■■□□□ 1
NPAS3-201ENST00000346562 SPPL3Q8TCT6 385 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 NDRG4Q9ULP0 352 aaKnown RBP21.3■■□□□ 1
NPAS3-201ENST00000346562 EDDM3AQ14507 147 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 TBPL2Q6SJ96 375 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 DNAJC5GQ8N7S2 189 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 GHSRQ92847 366 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 CXorf36Q9H7Y0 433 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 ANKRD10Q9NXR5 420 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 FPR3P25089 353 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 TPMTP51580 245 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 RNF4P78317 190 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 MITD1Q8WV92 249 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 FAM166BA8MTA8 275 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 B4GAT1O43505 415 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 ABHD4Q8TB40 342 aa21.3■■□□□ 1
NPAS3-201ENST00000346562 OR6C76A6NM76 312 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 HOXD11P31277 338 aaPredicted RBP21.29■■□□□ 1
NPAS3-201ENST00000346562 OR51A2Q8NGJ7 313 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 TMEM43Q9BTV4 400 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 SLCO5A1Q9H2Y9 848 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 BAZ2AQ9UIF9 1905 aaKnown RBP21.29■■□□□ 1
NPAS3-201ENST00000346562 OR10J4P0C629 311 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 GDNFP39905 211 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 FGGYQ96C11 551 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 FCRL1Q96LA6 429 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 PCDHGA5Q9Y5G8 931 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 DLG5Q8TDM6 1919 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 PMS2P1A4D2B8 440 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 CRYM-AS1A6NIL9 109 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 RFXAPO00287 272 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 PRKRAO75569 313 aaKnown RBP21.29■■□□□ 1
NPAS3-201ENST00000346562 SCG5P05408 212 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 MFSD12Q6NUT3 480 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 SFXN4Q6P4A7 337 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 ABHD17CQ6PCB6 329 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 KLHDC8BQ8IXV7 354 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 SEMA6DQ8NFY4 1073 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 DIMT1Q9UNQ2 313 aaKnown RBP21.29■■□□□ 1
NPAS3-201ENST00000346562 ELAVL4P26378 380 aaKnown RBP21.29■■□□□ 1
NPAS3-201ENST00000346562 CSNK1G2P78368 415 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 OR8G1Q15617 311 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 FJX1Q86VR8 437 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 SVBPQ8N300 66 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 PIGTQ969N2 578 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 GINS3Q9BRX5 216 aa21.29■■□□□ 1
NPAS3-201ENST00000346562 A0A0B4J2A0 478 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 LOC100289279A0A1B0GTE1 492 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 SLCO2B1O94956 709 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 NDUFB7P17568 137 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 DAPP51397 102 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 MAP2K6P52564 334 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 SHPKQ9UHJ6 478 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 TSTD3H0UI37 97 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 FADS1O60427 444 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 ADH4P08319 380 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 IL34Q6ZMJ4 242 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 CISD2Q8N5K1 135 aaKnown RBP21.28■■□□□ 1
NPAS3-201ENST00000346562 PSD2Q9BQI7 771 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 ERVMER34-1Q9H9K5 563 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 PTTG3PQ9NZH4 202 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 PAPLNO95428 1278 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 TGM4P49221 684 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 ELAVL1Q15717 326 aaKnown RBP21.28■■□□□ 1
NPAS3-201ENST00000346562 CORO2AQ92828 525 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 SLC6A17Q9H1V8 727 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 HEYLQ9NQ87 328 aaPredicted RBP21.28■■□□□ 1
NPAS3-201ENST00000346562 CEPT1Q9Y6K0 416 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 CD14P08571 375 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 FOLR1P15328 257 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 ZNF266Q14584 549 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 CREB3L2Q70SY1 520 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.28■■□□□ 1
NPAS3-201ENST00000346562 DCXRQ7Z4W1 244 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 OR2T11Q8NH01 316 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 SAT2Q96F10 170 aaPredicted RBP21.28■■□□□ 1
NPAS3-201ENST00000346562 ZBED3Q96IU2 234 aaPredicted RBP21.28■■□□□ 1
NPAS3-201ENST00000346562 ELF4Q99607 663 aaPredicted RBP21.28■■□□□ 1
NPAS3-201ENST00000346562 CD1CP29017 333 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 PLEKHF2Q9H8W4 249 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 CCDC88AQ3V6T2 1871 aa21.28■■□□□ 1
NPAS3-201ENST00000346562 GLCEO94923 617 aa21.27■■□□□ 1
NPAS3-201ENST00000346562 ALPLP05186 524 aa21.27■■□□□ 1
NPAS3-201ENST00000346562 ILKQ13418 452 aa21.27■■□□□ 1
NPAS3-201ENST00000346562 TATDN3Q17R31 274 aa21.27■■□□□ 1
NPAS3-201ENST00000346562 GLYR1Q49A26 553 aaPredicted RBP21.27■■□□□ 1
NPAS3-201ENST00000346562 PAQR9Q6ZVX9 377 aa21.27■■□□□ 1
NPAS3-201ENST00000346562 RPS19BP1Q86WX3 136 aaKnown RBP21.27■■□□□ 1
NPAS3-201ENST00000346562 FAM213BQ8TBF2 198 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms