RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 GPR17Q13304 367 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 L3MBTL4Q8NA19 623 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 RTL8BQ17RB0 113 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 TMEM25Q86YD3 366 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 UCK1Q9HA47 277 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 ASIC5Q9NY37 505 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 SLC22A7Q9Y694 548 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 PCM1Q15154 2024 aa15.21■□□□□ 0.03
PTCH1-201ENST00000331920 GLTPD2A6NH11 291 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 EIF3FO00303 357 aaPredicted RBP15.21■□□□□ 0.02
PTCH1-201ENST00000331920 PDGFBP01127 241 aaPredicted RBP15.21■□□□□ 0.02
PTCH1-201ENST00000331920 GLI4P10075 376 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 PVRP15151 417 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 SLC5A12Q1EHB4 618 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 STEAP1BQ6NZ63 245 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 TECTBQ96PL2 329 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 MRIQ9BWK5 157 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 SEMA4GQ9NTN9 838 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 KPTNQ9Y664 436 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 ATP23Q9Y6H3 246 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 SOX15O60248 233 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 CDC20BQ86Y33 519 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 CHST14Q8NCH0 376 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 OR5A2Q8NGI9 324 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 NFS1Q9Y697 457 aa15.21■□□□□ 0.02
PTCH1-201ENST00000331920 CCSO14618 274 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 PHOX2AO14813 284 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 MYBPHQ13203 477 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 GTDC1Q4AE62 458 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 THEM4Q5T1C6 240 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 PLXDC2Q6UX71 529 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 SPHK1Q9NYA1 384 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 OR52A1Q9UKL2 312 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 TMEM212A6NML5 194 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 RRP8O43159 456 aaKnown RBP15.2■□□□□ 0.02
PTCH1-201ENST00000331920 HTR4Q13639 388 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 IAH1Q2TAA2 248 aaPredicted RBP15.2■□□□□ 0.02
PTCH1-201ENST00000331920 MDGA2Q7Z553 956 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 PLPP7Q8NBV4 271 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 NTMT1Q9BV86 223 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 RNASEK-C17orf49H0YIS7 233 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 CSF2RAP15509 400 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 FABP9Q0Z7S8 132 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 RAB40BQ12829 278 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 MRPL2Q5T653 305 aaKnown RBP15.2■□□□□ 0.02
PTCH1-201ENST00000331920 C1orf74Q96LT6 269 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 C20orf85Q9H1P6 137 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 SIX2Q9NPC8 291 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 ZCWPW2A0A1B0GU75 182 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 WNT11O96014 354 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 CASP7P55210 303 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 OR10A3P58181 314 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 LAX1Q8IWV1 398 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 CMTM3Q96MX0 182 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 CSF3P09919 207 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 CD70P32970 193 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 SSR4P51571 173 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 GPR85P60893 370 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 PPP1R3BQ86XI6 285 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 KEAP1Q14145 624 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 DPPA4Q7L190 304 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 FAXDC2Q96IV6 333 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 CTRCQ99895 268 aa15.2■□□□□ 0.02
PTCH1-201ENST00000331920 WDR83Q9BRX9 315 aaKnown RBP15.2■□□□□ 0.02
PTCH1-201ENST00000331920 RNASE1P07998 156 aaKnown RBP15.19■□□□□ 0.02
PTCH1-201ENST00000331920 RELAQ04206 551 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 SLC6A19Q695T7 634 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 HBMQ6B0K9 141 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 TMEM163Q8TC26 289 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 SLC6A18Q96N87 628 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 APOOQ9BUR5 198 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 CHST6Q9GZX3 395 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 SCML1Q9UN30 329 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 SLC5A10A0PJK1 596 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 GPR32O75388 356 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 OR2G6Q5TZ20 316 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 NEIL2Q969S2 332 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 ARHGDIGQ99819 225 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 TMEM231Q9H6L2 316 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 M0QZ24 198 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 SCGB1A1P11684 91 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 RPS16P62249 146 aaKnown RBP15.19■□□□□ 0.02
PTCH1-201ENST00000331920 LSAMPQ13449 338 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 TOR2AQ5JU69 321 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 TOE1Q96GM8 510 aaKnown RBP15.19■□□□□ 0.02
PTCH1-201ENST00000331920 CPZQ66K79 652 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 PQLC3Q8N755 202 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 ABHD4Q8TB40 342 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 LRFN3Q9BTN0 628 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 MSL2Q9HCI7 577 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 ADAM29Q9UKF5 820 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 UMAD1C9J7I0 102 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 ICMTO60725 284 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 OR5H8P0DN80 308 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 SRPXP78539 464 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 LCN15Q6UWW0 184 aa15.19■□□□□ 0.02
PTCH1-201ENST00000331920 CLEC9AQ6UXN8 241 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms