RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 HTD2P86397 168 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 DCXRQ7Z4W1 244 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 TP53TG5Q9Y2B4 290 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 TRBV5-4A0A0C4DH59 114 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 PMS2P2O95744 297 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 CD46P15529 392 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 OR1D5P58170 312 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 BTG1P62324 171 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 FAPQ12884 760 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 MLF2Q15773 248 aaPredicted RBP10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 SFRP5Q5T4F7 317 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 CD276Q5ZPR3 534 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 LINC00299Q6ZSB3 139 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 BORCS7Q96B45 105 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 MSI2Q96DH6 328 aaKnown RBP10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 TEAD3Q99594 435 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 ATP13A2Q9NQ11 1180 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 TMEM100Q9NV29 134 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 GRB2P62993 217 aaKnown RBP10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 TGFBR3Q03167 851 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 CNEP1R1Q8N9A8 125 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 ZNF511Q8NB15 262 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 PXT1Q8NFP0 134 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 POC1BQ8TC44 478 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 SLCO5A1Q9H2Y9 848 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 TMEM221A6NGB7 291 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 TARM1B6A8C7 271 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 IDH3GP51553 393 aaPredicted RBP10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 RPL27P61353 136 aaKnown RBP10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 IKZF1Q13422 519 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 FAM26EQ8N5C1 309 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 DUSP22Q9NRW4 184 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 SPHK1Q9NYA1 384 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 KIF25Q9UIL4 384 aa10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 NXT1Q9UKK6 140 aaKnown RBP10.04□□□□□ -0.8
SNRNP200-201ENST00000323853 PRAMEF25A6NGN4 478 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 TNFRSF10CO14798 259 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ZNF749O43361 778 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 EIF4E2O60573 245 aaKnown RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 SLC2A10O95528 541 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ITGB2P05107 769 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 SERPINA7P05543 415 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 BLVRBP30043 206 aaPredicted RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 DUSP8Q13202 625 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ASAH1Q13510 395 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 IHHQ14623 411 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 PARM1Q6UWI2 310 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 PRSS45Q7RTY3 260 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 TMEM179BQ7Z7N9 219 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 OR14J1Q9UGF5 321 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 DAPP1Q9UN19 280 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CORINQ9Y5Q5 1042 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 DOCK1Q14185 1865 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 BET1O15155 118 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ZNF728P0DKX0 622 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ARRB2P32121 409 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ECI1P42126 302 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 P2RX1P51575 399 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CARD18P57730 90 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 MSMO1Q15800 293 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CREB3L2Q70SY1 520 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 OR1E3Q8WZA6 343 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ANKRD9Q96BM1 317 aaPredicted RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ASB16Q96NS5 453 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 FBXO8Q9NRD0 319 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 GPR55Q9Y2T6 319 aaPredicted RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 A0A1B0GX78 115 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 OR6C6A6NF89 314 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 GPX5O75715 221 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 EIF1P41567 113 aaKnown RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 RAB5CP51148 216 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 TPMTP51580 245 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 AADACL3Q5VUY0 350 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ZNF610Q8N9Z0 462 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 OR6M1Q8NGM8 313 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CPT1CQ8TCG5 803 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 SEC22AQ96IW7 307 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 LRFN5Q96NI6 719 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 SLC25A19Q9HC21 320 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 EXOSC3Q9NQT5 275 aaKnown RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 NECAP2Q9NVZ3 263 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 TBC1D29Q9UFV1 150 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 TMEM184BQ9Y519 407 aaPredicted RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CCDC163A0A0D9SF12 145 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 MSTNO14793 375 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 ZNF93P35789 620 aaPredicted RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CCR9P51686 369 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 HCCSP53701 268 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 EBPQ15125 230 aaKnown RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 C14orf28Q4W4Y0 310 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 GLYATL3Q5SZD4 288 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 HEPHL1Q6MZM0 1159 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 TMUB2Q71RG4 321 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 KLHDC8BQ8IXV7 354 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 TAAR8Q969N4 342 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 CPNE4Q96A23 557 aaPredicted RBP10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 SDF2Q99470 211 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 PISDQ9UG56 409 aa10.03□□□□□ -0.8
SNRNP200-201ENST00000323853 MUTYHQ9UIF7 546 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms