RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ARRDC3Q96B67 414 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 FAM3DQ96BQ1 224 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 MKL2Q9ULH7 1088 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 LOC285556D6RIA3 1793 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 H7C417 338 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 GALR3O60755 368 aaPredicted RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 F13BP05160 661 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 CSF2RBP32927 897 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 DIO1P49895 249 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 SNRPEP62304 92 aaKnown RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 TMEM200AQ86VY9 491 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 GABRG1Q8N1C3 465 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 OR14C36Q8NHC7 312 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 WFIKKN2Q8TEU8 576 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 C14orf79Q96F83 325 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 Q96M85 177 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 RSPO3Q9BXY4 272 aaPredicted RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 CHST6Q9GZX3 395 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 RGCCQ9H4X1 137 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 MTFP1Q9UDX5 166 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 F12P00748 615 aaPredicted RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 SNRNP70P08621 437 aaKnown RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 ABHD13Q7L211 337 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 CMTM3Q96MX0 182 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 SLC25A21Q9BQT8 299 aaPredicted RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 FKRPQ9H9S5 495 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 CENPMQ9NSP4 180 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 ST6GALNAC2Q9UJ37 374 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 POLR1DQ9Y2S0 133 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 DOCK6Q96HP0 2047 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 FITM1A5D6W6 292 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 TMEM200CA6NKL6 621 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 MCIDASD6RGH6 385 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 DNASE2O00115 360 aaPredicted RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 BCL2L11O43521 198 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 HPP00738 406 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 SFTPBP07988 381 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 CPMP14384 443 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 SPI1P17947 270 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 ARHGAP11BQ3KRB8 267 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 ULK3Q6PHR2 472 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 OR1J2Q8NGS2 313 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 RPH3AQ9Y2J0 694 aaPredicted RBP11.94□□□□□ -0.5
TRIM35-201ENST00000305364 TMEM14AQ9Y6G1 99 aa11.94□□□□□ -0.5
TRIM35-201ENST00000305364 TMEM218A2RU14 115 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 OGG1O15527 345 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 XRCC3O43542 346 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 FABP1P07148 127 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 DHCR24Q15392 516 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 GUCA2BQ16661 112 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 FAM199XQ6PEV8 388 aaPredicted RBP11.93□□□□□ -0.5
TRIM35-201ENST00000305364 ZNF101Q8IZC7 436 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 ACBD4Q8NC06 268 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 OR6N1Q8NGY5 312 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 PHOSPHO1Q8TCT1 267 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 TCTEX1D2Q8WW35 142 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 SGIP1Q9BQI5 828 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 SLC19A3Q9BZV2 496 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.93□□□□□ -0.5
TRIM35-201ENST00000305364 TTLL8A6PVC2 850 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 OR2A4O95047 310 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 NR0B1P51843 470 aaKnown RBP11.93□□□□□ -0.5
TRIM35-201ENST00000305364 PDGFRLQ15198 375 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 MRM1Q6IN84 353 aaKnown RBP11.93□□□□□ -0.5
TRIM35-201ENST00000305364 VITQ6UXI7 678 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 PUSL1Q8N0Z8 303 aaKnown RBP11.93□□□□□ -0.5
TRIM35-201ENST00000305364 CAMKVQ8NCB2 501 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 OR2A1Q8NGT9 310 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 STK35Q8TDR2 534 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 SLC25A38Q96DW6 304 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 OR2A7Q96R45 310 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 FBXO34Q9NWN3 711 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 ZNF230Q9UIE0 474 aaPredicted RBP11.93□□□□□ -0.5
TRIM35-201ENST00000305364 CENPVL1A0A0U1RR11 272 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 A0A1B0GTH9 108 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 TSPAN11A1L157 253 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 CTNSO60931 367 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 FBXO24O75426 580 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 THBS1P07996 1170 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 SPP1P10451 314 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 NTHL1P78549 312 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 S100A12P80511 92 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 ALG10Q5BKT4 473 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 OTPQ5XKR4 325 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 TMPRSS11FQ6ZWK6 438 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 SLC35D2Q76EJ3 337 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 OR2L3Q8NG85 312 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 SFT2D1Q8WV19 159 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 FAM46BQ96A09 425 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 GAL3ST3Q96A11 431 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 CHMP1AQ9HD42 196 aaPredicted RBP11.93□□□□□ -0.5
TRIM35-201ENST00000305364 Q9N2J8 555 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 LHX9Q9NQ69 397 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 PRDM7Q9NQW5 492 aa11.93□□□□□ -0.5
TRIM35-201ENST00000305364 DOK2O60496 412 aa11.92□□□□□ -0.5
TRIM35-201ENST00000305364 AK1P00568 194 aa11.92□□□□□ -0.5
TRIM35-201ENST00000305364 OR3A2P47893 321 aa11.92□□□□□ -0.5
TRIM35-201ENST00000305364 ARFRP1Q13795 201 aa11.92□□□□□ -0.5
TRIM35-201ENST00000305364 METRNLQ641Q3 311 aa11.92□□□□□ -0.5
TRIM35-201ENST00000305364 OR4K17Q8NGC6 315 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms