RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MELKQ14680 651 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 SLC6A19Q695T7 634 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 CREB3L2Q70SY1 520 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 CEACAM19Q7Z692 300 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 ZBTB44Q8NCP5 570 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 GHSRQ92847 366 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 PELI1Q96FA3 418 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 DIRAS2Q96HU8 199 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 ARL5BQ96KC2 179 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 RNF32Q9H0A6 362 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 RXFP3Q9NSD7 469 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 SLC6A5Q9Y345 797 aa12.27□□□□□ -0.44
VMP1-201ENST00000262291 EML6Q6ZMW3 1958 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 H3BML4 177 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 ARPC3O15145 178 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
VMP1-201ENST00000262291 HLA-DOBP13765 273 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 TNK1Q13470 666 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 MFSD13AQ14CX5 517 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 PRAMEF20Q5VT98 475 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 TCTE3Q8IZS6 198 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 OR6V1Q8N148 313 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 BMPERQ8N8U9 685 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 AGBL5Q8NDL9 886 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 RHBDD1Q8TEB9 315 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 TRAF4Q9BUZ4 470 aaPredicted RBP12.27□□□□□ -0.45
VMP1-201ENST00000262291 JAM3Q9BX67 310 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 KCNN2Q9H2S1 579 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 NCDNQ9UBB6 729 aa12.27□□□□□ -0.45
VMP1-201ENST00000262291 RALGAPA1Q6GYQ0 2036 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 A0A1B0GTH9 108 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 A0A1W2PQD3 144 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 G3V3Y1 287 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 SDHAP31040 664 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 FGF9P31371 208 aaPredicted RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 MPLP40238 635 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 POLR2HP52434 150 aaKnown RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 RPS18P62269 152 aaKnown RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 LINC01590Q5TEZ4 76 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 C1orf140Q5VVS0 124 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 PEAR1Q5VY43 1037 aaPredicted RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 SLC23A3Q6PIS1 610 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 ABHD4Q8TB40 342 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 HSD17B8Q92506 261 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 NMNAT2Q9BZQ4 307 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 WDR76Q9H967 626 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 GPN3Q9UHW5 284 aaPredicted RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 TRAPPC4Q9Y296 219 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 TRAV36DV7A0A075B6V5 113 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 NTN3O00634 580 aaPredicted RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 C1QBP02746 253 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 CSF3P09919 207 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 CFL1P23528 166 aaKnown RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 ACSM1Q08AH1 577 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 ETFDHQ16134 617 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 ODF4Q2M2E3 257 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 GLYR1Q49A26 553 aaPredicted RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 IDNKQ5T6J7 187 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 MRPL14Q6P1L8 145 aaKnown RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 LHFPL5Q8TAF8 219 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 ZNF417Q8TAU3 575 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 ST8SIA2Q92186 375 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 MARC2Q969Z3 335 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 ZNF587Q96SQ5 575 aaPredicted RBP12.26□□□□□ -0.45
VMP1-201ENST00000262291 C1QTNF6Q9BXI9 259 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 B3GNT2Q9NY97 397 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 HAO2Q9NYQ3 351 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 MYOTQ9UBF9 498 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 R4GN57 208 aa12.26□□□□□ -0.45
VMP1-201ENST00000262291 SLC22A5O76082 557 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 OR8G3PP0DMU2 310 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 FGF5P12034 268 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 EDNRAP25101 427 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 LGALS3BPQ08380 585 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 FOXF1Q12946 379 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 BTN1A1Q13410 526 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 ZBTB37Q5TC79 503 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 LRRC69Q6ZNQ3 347 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 WDFY1Q8IWB7 410 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 RDH10Q8IZV5 341 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 LILRB1Q8NHL6 650 aaPredicted RBP12.25□□□□□ -0.45
VMP1-201ENST00000262291 HGDQ93099 445 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 FBXW5Q969U6 566 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 PGLYRP3Q96LB9 341 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 DEFB126Q9BYW3 111 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 SLC39A1Q9NY26 324 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 ST6GALNAC2Q9UJ37 374 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 CLEC4AQ9UMR7 237 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 B3GALT1Q9Y5Z6 326 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 A0A0B4J203 849 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 YKT6O15498 198 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 LDOC1O95751 146 aaPredicted RBP12.25□□□□□ -0.45
VMP1-201ENST00000262291 UMODP07911 640 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 SYPP08247 313 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 SP9P0CG40 484 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 TFPIP10646 304 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 SLC2A2P11168 524 aaPredicted RBP12.25□□□□□ -0.45
VMP1-201ENST00000262291 OR7A5Q15622 319 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 PLET1Q6UQ28 207 aa12.25□□□□□ -0.45
VMP1-201ENST00000262291 GPX7Q96SL4 187 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms