RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 USP51Q70EK9 711 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 SERPINA12Q8IW75 414 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 ABHD4Q8TB40 342 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 OR2A5Q96R48 311 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 SIDT1Q9NXL6 827 aaKnown RBP12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 UBFD1O14562 309 aaKnown RBP12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 GPR137BO60478 399 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 BDKRB2P30411 391 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF81P51508 661 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 KHDC1Q4VXA5 237 aaKnown RBP12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 VASH2Q86V25 355 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 BEST3Q8N1M1 668 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 OR6S1Q8NH40 331 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 LIPHQ8WWY8 451 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 C16orf58Q96GQ5 468 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 MARCH7Q9H992 704 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 VAPAQ9P0L0 249 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 ALG1L2C9J202 215 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 MED6O75586 246 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 AKR1C2P52895 323 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 RAB35Q15286 201 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 TRAPPC4Q9Y296 219 aa12.25□□□□□ -0.45
PRPF38A-201ENST00000257181 KIAA0513O60268 411 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SERPINE2P07093 398 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SMIM21Q3B7S5 101 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 CCSMST1Q4G0I0 132 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 PAGE3Q5JUK9 113 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF441Q8N8Z8 693 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 EVPLQ92817 2033 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 RFT1Q96AA3 541 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 TGIF2Q9GZN2 237 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 LPAR3Q9UBY5 353 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 B3GNT3Q9Y2A9 372 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 KIR2DS1A0A191URI9 304 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 AGAP5A6NIR3 686 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 CLIC3O95833 236 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SDHAP31040 664 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 KIR2DS4P43632 304 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 AQP4P55087 323 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 KIR2DS1Q14954 304 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 ODF4Q2M2E3 257 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 HFEQ30201 348 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF425Q6IV72 752 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 LRRC18Q8N456 261 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 LILRA3Q8N6C8 439 aaPredicted RBP12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 PSME4Q14997 1843 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 FAM90A27PA6NNH2 459 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 NRG2O14511 850 aaPredicted RBP12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 GTF2F2P13984 249 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC2A5P22732 501 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 ERP29P30040 261 aaKnown RBP12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 ZIC1Q15915 447 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 DPY19L2P1Q6NXN4 242 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 RETREG3Q86VR2 466 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC22A24Q8N4F4 322 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 DTWD1Q8N5C7 304 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 GMPPAQ96IJ6 420 aaPredicted RBP12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 TMEM68Q96MH6 324 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 B3GNT2Q9NY97 397 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 CCL21O00585 134 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 DHHO43323 396 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 AQP8O94778 261 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 FAPQ12884 760 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 PPA1Q15181 289 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 PRR7Q8TB68 274 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 PRRT1Q99946 306 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 OCIAD1Q9NX40 245 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 NUP50Q9UKX7 468 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SUB1P53999 127 aaKnown RBP eCLIP12.24□□□□□ -0.455e-10■■□□□ 11.8
PRPF38A-201ENST00000257181 MLLT10P55197 1068 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 MTCP1P56278 107 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 MLF1P58340 268 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 AGAP6Q5VW22 663 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 OR4D6Q8NGJ1 314 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 H1FXQ92522 213 aaKnown RBP12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC30A2Q9BRI3 323 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 TMEM100Q9NV29 134 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 TP53TG5Q9Y2B4 290 aa12.24□□□□□ -0.45
PRPF38A-201ENST00000257181 SP1P08047 785 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 SERPINF1P36955 418 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 AQP2P41181 271 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 MARVELD2Q8N4S9 558 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 ARIH2OSQ8N7S6 290 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 ZMYND19Q96E35 227 aaPredicted RBP12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 TRAPPC2LQ9UL33 140 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 TUBAL3A6NHL2 446 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 TSC22D2O75157 780 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 PRH1P02810 166 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 ARNTP27540 789 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 EIF2B2P49770 351 aaKnown RBP12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 BTG2P78543 158 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 GALEQ14376 348 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 GSG1Q2KHT4 349 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 PNPLA1Q8N8W4 532 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 CMSS1Q9BQ75 279 aaKnown RBP12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 EGLN3Q9H6Z9 239 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms