RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	GIPR	P48546	466 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	BCDIN3D	Q7Z5W3	292 aa	Known RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	B3GNT7	Q8NFL0	401 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ACY3	Q96HD9	319 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	MS4A4E	Q96PG1	132 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PSD2	Q9BQI7	771 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZNF436	Q9C0F3	470 aa	Predicted RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	MPC1L	P0DKB6	136 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SLC6A12	P48065	614 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	GALE	Q14376	348 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ELAVL3	Q14576	367 aa	Known RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ASTL	Q6HA08	431 aa	Predicted RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	BLNK	Q8WV28	456 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	IMP4	Q96G21	291 aa	Known RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SSSCA1	O60232	199 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	OR2F2	O95006	317 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	NDUFB2	O95178	105 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	KCNJ8	Q15842	424 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	UNC5D	Q6UXZ4	953 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZNF595	Q8IYB9	648 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PLPP7	Q8NBV4	271 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	AIG1	Q9NVV5	245 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	STYXL1	Q9Y6J8	313 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	NPC1	O15118	1278 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SIX6	O95475	246 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	OXSR1	O95747	527 aa	Predicted RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	RGN	Q15493	299 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	LYPD4	Q6UWN0	246 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SLC19A3	Q9BZV2	496 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	WSB2	Q9NYS7	404 aa	Predicted RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PCSK6	P29122	969 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SPINT3	P49223	89 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ATP4B	P51164	291 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PRPS1	P60891	318 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PAGE3	Q5JUK9	113 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SLC24A4	Q8NFF2	622 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZNF582	Q96NG8	517 aa	Predicted RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PGAP2	Q9UHJ9	254 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	OR4K5	Q8NGD3	323 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	GGH	Q92820	318 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	FOXC2	Q99958	501 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	UBTD1	Q9HAC8	227 aa		15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZNF334	Q9HCZ1	680 aa	Predicted RBP	15.17	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PRAMEF25	A6NGN4	478 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276		A6NIZ1	184 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SRPX2	O60687	465 aa	Predicted RBP	15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	RAP1B	P61224	184 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	RAP1A	P62834	184 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SPANXN5	Q5MJ07	72 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PRAMEF5	Q5TYX0	476 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PRAMEF6	Q5VXH4	476 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PTCRA	Q6ISU1	281 aa	Predicted RBP	15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	THSD4	Q6ZMP0	1018 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	HSD11B1L	Q7Z5J1	315 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SLC23A1	Q9UHI7	598 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	C5orf49	A4QMS7	147 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	TNFRSF10A	O00220	468 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	CYTIP	O60759	359 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ATXN1L	P0C7T5	689 aa	Known RBP	15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SNRPB	P14678	240 aa	Known RBP	15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	CA5A	P35218	305 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	HSF1	Q00613	529 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PNCK	Q6P2M8	343 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	TIFAB	Q6ZNK6	161 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	TMEM123	Q8N131	208 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	MTMR14	Q8NCE2	650 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	NEIL2	Q969S2	332 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	WDR83	Q9BRX9	315 aa	Known RBP	15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	TMEM231	Q9H6L2	316 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	LIPT1	Q9Y234	373 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	TEK	Q02763	1124 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZNF789	Q5FWF6	425 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	CORO6	Q6QEF8	472 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	C17orf107	Q6ZR85	190 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	LINC00469	Q8N7U9	141 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	OR2M3	Q8NG83	312 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	C8orf44	Q96CB5	159 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PRAMEF26	H0Y7S4	382 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZNF280A	P59817	542 aa	Predicted RBP	15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	H3F3A	P84243	136 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZFAND1	Q8TCF1	268 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	BMF	Q96LC9	184 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	LMF2	Q9BU23	707 aa	Known RBP	15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZNF840P	A6NDX5	716 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	C9orf172	C9J069	976 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PSMB2	P49721	201 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	RAB7A	P51149	207 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	DEFB123	Q8N688	67 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	NPW	Q8N729	165 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	KATNB1	Q9BVA0	655 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	AP5S1	Q9NUS5	200 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	IGKV3D-11	A0A0A0MRZ8	115 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	IGKV3-11	P04433	115 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	DEFA6	Q01524	100 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZNF141	Q15928	474 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	OR13J1	Q8NGT2	312 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	SFT2D1	Q8WV19	159 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	POFUT1	Q9H488	388 aa		15.16	■□□□□ 0.02
CACNA1A-238	ENST00000637276	ZCWPW2	A0A1B0GU75	182 aa		15.15	■□□□□ 0.02
CACNA1A-238	ENST00000637276	PRKACB	P22694	351 aa		15.15	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms